Lolium rigidum (rigid ryegrass): 124662084
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Entry
124662084 CDS
T09103
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124662084
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124662084
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124662084
04121 Ubiquitin system [BR:
lrd04121
]
124662084
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124662084
Peptidases and inhibitors [BR:
lrd01002
]
Metallo peptidases
Family M67
124662084
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Others
Others
124662084
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
124662084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
Mre11_C_bact
Motif
Other DBs
NCBI-GeneID:
124662084
NCBI-ProteinID:
XP_047055930
LinkDB
All DBs
Position
6:complement(117234187..117244450)
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AA seq
417 aa
AA seq
DB search
MAMTSPRRARRDTSIEGLARPVAVDHRISLPYYFRIADNLLRQANIYREEKNLVDLYIIL
LRYSSLLSETIPKHRDYHAFKSREKEFLKKGPHNSDKLLNVISELESLKPIVKEQIAQLA
PSPPMVQPAFGSATGPLQKTFSKGGHQEASPQGVEPDRQLVKSSTSLPYLKDETLSRHSI
LGPNGLHGQWTGPVTGVKIQYPSYPELTQSDIPSLVPAILNQNGSYGSSTTSLDGSTNIN
GDMQSVLSLDDGRWSLPVKGPASVSYAGFEEEFSQLNIRQPSPPPVLAQVHPKHRPISPS
RVADPRPGLATCDTGRFQNLHVPVALMESFLRLAEANTANNLETCGILAGYLKKRTFYVT
TLIIPKQKSTSDSCQATNEEEIFEVQDKASLFTLGWIHFLLILTLGHQSSMTDYYRQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccatgacatcacctaggcgagctaggagggacacaagcatcgaggggctggcgcgt
ccggtcgcggtcgaccaccgcatcagcctcccctactatttccggatcgccgacaatctt
ctccgccaggctaacatataccgagaggaaaagaacctggtcgacctgtacattatcctc
ctgagatactcgagcctattgtccgagacgatcccgaagcatcgcgattaccatgcattc
aagtcaagagaaaaggaattcttgaagaaagggccacataactctgataaactcttgaat
gttatcagcgagctagagtctctgaagccgattgtgaaggagcaaattgctcagcttgct
ccaagtccacctatggtgcagccagcttttggaagtgcaacaggtccattgcagaaaacg
ttctctaaggggggccatcaagaggcatcgccacagggtgttgaacctgataggcagcta
gtcaaatcgtctaccagtttgccatatctaaaggacgaaacattatccaggcattcaata
cttggaccgaatggtcttcatggccaatggacagggcctgtcactggcgtcaagatccag
tacccaagttaccccgaactaacccaaagtgatatccctagtttagtgccagcaatcttg
aaccaaaatggctcatatggttctagtacaacatcgctggatggatccacaaatatcaat
ggtgatatgcagtctgttctctcacttgacgatggtcgatggtctttaccagtaaaaggg
ccagcatctgtatcttatgctggttttgaggaagaattctcccagctgaatatcaggcag
ccttctcccccaccagtcctggcacaagtacaccctaaacatagaccaatttctccatca
agagtagctgatccaagaccaggattggctacctgtgacacaggacgttttcagaatttg
catgtgccggtggcgttaatggagtcttttctgaggcttgctgaggcaaatactgcaaat
aatttggaaacatgtggaattcttgctggttacctgaaaaagaggaccttttatgtgacg
acactgataattcctaagcagaaatcaacgtctgattcatgtcaagctacaaatgaagaa
gaaatatttgaagttcaggacaaagcctcacttttcactcttggttggattcactttcta
ctaatattgactttgggacatcaatctagcatgactgactattacagacagtaa
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