Lolium rigidum (rigid ryegrass): 124662173
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Entry
124662173 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124662173
KO
K12397
AP-3 complex subunit beta
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124662173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124662173
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Others
AP-3 complex
124662173
Endosome - Golgi transport
124662173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
HEAT_2
HEAT
AP3B1_C
Motif
Other DBs
NCBI-GeneID:
124662173
NCBI-ProteinID:
XP_047056005
LinkDB
All DBs
Position
6:complement(12253030..12265956)
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AA seq
1891 aa
AA seq
DB search
MGMFGLQASGAAASWMVGRMGTDAHLYDDPEDAALPALLDSRFCQGLVVLWSSGSIGILT
KWYQSERFPAKISTGGSSSDSSMATVPTPFFPTTMVPPPPCGCGAPPYAPCSFSPAATCT
PTPFPGGYYPPAFPYAGTYPYPPPASAYTPAYGFSPNWPNWPPPAPYPTPYTSTSSPPNF
PVTSDLHPAGFDHHPVPAPDTAPTTPNRDLRPIQSHISSKTSSSPAHHTSSSPKEVGEYP
ARVSRPHVVVRTPRRRRSHSAMRSTRALPHHPDEDLAPLRATPMHPDHHVHGDGLAPSCA
APLHPDRQDGHVPLQFVQEGPHHGDQASANSERQATDYTSAPRLPPLDGLLTDVFDGTPE
VTFSAPSRSSTCAAASSSEIPLGSRFGESFAAPTLVCPVSATSAPTLQSATADTAMQLFD
EMSQQYDFQNLNHKSLFLADGTERSYYALPDNYALERVVPESVFAVDDDNPDGRSNEFVH
VLTSTPEQRSYAEEQQDIEHILKCVSRAPETEQTLACLNYLTDVQQQHKFEKASVHVQQL
SDPQSNVLVIHERRKEWDPGASIFLMTPQNDDSSNDPIGNGHVGKLVSSAGHFYFLGTTD
LWSQSEYRSVVIRVFEDVMLNKPPAKPPDMYGIAASLLPVILLEVQKAVNLSVHTHFNFL
SCNSKQFSAIQTIQGNLFSPEATQSWQRGALSLGNWAISALWRNTTLDGDKIFGAQHILD
SSMKKGIHILSWNPWYAFLWEFSMDKVSSKTAVPTLMDLRHFWAQFWSQSHSWYNTSADF
LQKQFCSLPATLACSVGQKLFSLQSIHRDPDSFDGDKVDALKRLLALIAQGVDVAHLFPQ
VVKNVAAQSLEVKKLVYLYLLHYAENRQNEALLSINIFQKDLSDINPLVRAWALRTMAGI
RLHVVAPLVLVAVKKCARDPSPYVRKCAAYALCKLYDLLPEENTTLEEVVDVLLGDSSSG
VVGAAAVAFNSVCPNGLALIAKHFRKLCETLPDIEEWYQITLIEILLRYVIARHGLVKES
AIFASNLSWEIQGAKDSVPVDNMSCIQAETVVNGACGTISSMTLLRHYIDEYSACFDGEG
DKIRSPPVTTSTNEDVTILLKCTSPLLWSQNSGVILAAASVHWIMAPVQEVKIIVGPILF
TLRSSPDATYVMLGNILVFAKTAPLLFAPYYEDFFICASDPYQTRALKLEIITTIATESS
IPAILEEFQDYIKDPNRRFVADTVAAIALCAEKLPSVTSTCLEGLLALVFYESSIANSVH
LDGEDVVLVQAILSIKAIVKIDAACHEKVIIRLVRTLDVIKEPAARSLIIWIFGEYSSTG
NLILRIAPAVLKYLAWSFAAEVLETKLQILNTCAKVIIHAAEEHLQEFKREHLQEFKRIV
AYVIQLAACDMNYDVRDRARFLSGLLPFCANENDSSCRSQNADVCKELADHIFDGKIHSA
SNSDSNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMVLIHKTMESTRGVADSSDSNNSDAE
SGSSANESGSLYDSESEGGDLFDRDGTGSKQYSNDDGHNLHRQEGNQEAPLVNMYDGSVG
QGHAGQDDENLASLISTDLTELMSKSALESWLDEAPTTPLVQNSIQASCARVSFTTRSFE
RKPKLHVLLDPSNSNGLSVLYAFSSEVSPNSRLLVCIDLFVENVTPDQLVDITIKSEEAS
TSEHGMETSEGSASIPTPVPMEEIQSLAPQQTAKRVLQVHFHHHILPMKLSVFCNGKRHP
AKLHPDIAYFVRPLPMDLNAFLCKENQLRGMFEYARRCTFKDHLQNPEHTEDSADNTDKN
LLVAQSLASKLLSNANVHLVSMDMPVTFSIDDASGLCWRFCSEILSNSYPCLITVVAEGH
ASGPLDLTIKVNCEDTVFGLNLLNRVVAIIE
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggggatgttcgggctgcaggcgagcggcgcggcggcgtcgtggatggtggggcggatg
ggcacggacgcgcacctctacgacgaccccgaggacgccgccctcccggcgctcctcgac
tcccgcttctgtcagggactagtagtgctatggagtagtggatccatcgggatcctgaca
aagtggtatcagagcgagcgattcccggccaaaatttccaccggcggctcctcttccgat
tcatccatggcaaccgtgcccacccccttcttccccaccaccatggttcccccacccccg
tgtggctgcggagcgccgccatacgccccctgcagtttctcccccgccgccacctgcaca
cctactccttttcccggcggctattacccacccgcgttcccctacgccggcacctacccc
tacccacctcccgcctccgcgtacacgcccgcatatggcttctccccaaactggccaaat
tggccaccgcctgctccatacccaactccatacaccagcacttcctctcctcccaatttt
ccagtcacatcagatctgcatcccgccggcttcgaccaccatccagttccggctcccgac
accgccccgaccactccaaatcgagacctccgcccgatccagagccacatctcctccaag
acctcctcgtcaccggcccaccacacgtcgtcgtcgcccaaggaagtgggcgagtaccct
gcgcgagtttcccgaccacacgtcgttgttcgaacccctcgacgccgacggtctcattca
gcaatgaggtcgaccagggcgctcccacaccatcccgacgaagaccttgcaccactacgt
gcaacccccatgcatccagatcatcatgtgcacggagatggccttgcgccatcatgtgca
gcccccctgcatccagatcgccaagatggtcatgttccgctccaatttgtgcaagaggga
cctcaccatggagatcaagcttcggccaactccgagaggcaggccactgactacacctcc
gcgcccaggcttccaccgctcgacggcctcctcactgacgtcttcgacggcactcctgag
gtgaccttttctgctccctcaaggtcctctacgtgtgcagcagcaagctcatcagaaatt
cctcttggctcccgttttggcgaatcttttgctgctcctacactggtgtgccctgtttct
gcaacaagtgcaccaacactacaatcagctactgcagataccgctatgcaattgttcgat
gaaatgtcacagcaatatgattttcaaaatctcaaccacaaaagtttgttcctagcagat
ggtactgagcgtagctactatgcgctaccagataattatgccttagagcgagtcgttcct
gagtcagtgttcgctgttgacgacgacaatccagatggccgctcaaatgagtttgttcat
gtgctcactagcactcctgagcagcggtcatatgcagaagagcagcaagacattgaacat
attctcaagtgtgtcagcagggcaccagaaactgaacaaacacttgcttgtctgaattat
ctcactgatgtgcagcagcaacacaagtttgagaaggcatcagtacatgtacaacagctg
agcgacccacagtcaaatgtattagtaattcatgagagaagaaaagaatgggatccagga
gcttcaatatttctaatgacccctcagaatgacgacagcagcaacgacccaattggcaat
ggacatgttgggaaactagtcagcagtgcaggtcatttttacttccttggtacgactgac
ctatggtcccaatctgaatatcggtccgttgtgattagagtatttgaggatgttatgcta
aataaaccaccagctaaacctcccgatatgtatggtatcgctgcttcattactgccggtt
attctgttggaagtacagaaggctgtgaacttatctgtacatactcatttcaacttcttg
agctgcaacagtaagcaattctcagctatacagactatacagggtaatcttttctctcct
gaagccacccaatcgtggcaaagaggtgctctcagtcttggcaattgggctatatcagct
ctctggcgtaatacaactctggatggagataaaatatttggagctcagcatattcttgat
tcatcaatgaaaaagggcattcacattttgtcttggaatccatggtatgcatttttgtgg
gagttctcaatggataaggtgtcaagcaaaactgcagtgccaactctaatggacctgagg
catttctgggcacaattctggtctcagtctcattcctggtacaatacttcggctgatttc
ctccagaaacagttctgcagtttgcctgctactcttgcatgttcagttggacagaagcta
ttctctctgcaatctatccatcgggatcctgacagcttcgacggcgacaaggtcgacgcg
ctcaagcgcctcctcgcgctcatcgcgcagggcgtcgacgtcgcgcacctcttcccgcag
gtggtcaagaacgtggcagcacagtcgctggaggtcaagaagctcgtctacctctacctc
ctccactacgccgagaaccgccaaaacgaagctctcctttctatcaacatattccagaag
gatttatcagacataaacccattagtgagggcttgggccctccgcactatggctggtatc
cgattgcacgttgtcgctccactcgtgttagtggctgtgaagaaatgtgccagggatcca
tcgccatatgtcaggaaatgtgcggcttatgcactttgtaagctctacgacttgcttcca
gaggaaaacacgactttggaggaggttgtggatgtcttgctcggtgacagttcctctggt
gtagtgggagctgctgctgttgcatttaattcagtgtgtccaaatggtttagcgctgata
gcaaagcatttccgaaagctctgtgagacactccccgatattgaagaatggtatcagatt
actctaattgagatcctcttgcgatatgtgattgctagacatggattggttaaggagtct
gcaatatttgcttcaaatttgtcttgggagatccagggtgctaaagattcagttcctgtt
gataatatgtcctgcatccaagctgaaactgttgttaatggagcgtgtggcactatctca
agcatgacgttgcttcggcattacattgacgaatattcagcatgttttgatggagagggt
gataaaatcagaagtccacctgtcactactagcacaaatgaagatgtcacaattctttta
aaatgcacatcgcctcttctgtggagccaaaatagtggagtgatacttgcagcagcaagt
gttcattggataatggctccagttcaggaagtgaagataattgttggcccgattttattt
accctacgctcgtctcctgatgcaacatatgtgatgcttggcaacatactagttttcgcc
aagactgctcctttattgtttgctccatattatgaagatttcttcatatgtgcttcagac
ccatatcagactagggctttgaagcttgaaataatcaccaccatcgctacagagtcgtct
attccagccattcttgaagaatttcaggattatattaaagacccgaataggagatttgtg
gccgatacagttgctgcaattgcactgtgtgccgaaaagctcccctctgtcacctccact
tgccttgaagggcttttggcacttgtattttatgaatcatctatcgcaaactcagttcac
ttggatggagaagatgttgtgttagtccaagctatcctttcaatcaaagcaatagtgaaa
atagatgcagcatgtcacgaaaaggtgattatccgtttggttcgtactctggatgtaatt
aaggagcctgcagcacgatccttaattatttggatatttggcgagtatagctccactggg
aatctcatcctgaggattgctccagctgttctcaagtatctggcatggtcctttgctgct
gaagtgctcgagacaaagcttcagatcttaaatacttgtgcaaaggttatcatacatgct
gcagaagaacacctacaagagttcaaaagggaacacctacaagagttcaaaaggatagtg
gcatatgtaattcagcttgctgcatgtgacatgaattatgatgtccgtgatcgtgcacgt
tttctatcaggacttctgccattctgtgctaatgaaaatgactcctcatgtcgatcacag
aatgcagatgtttgtaaggaactagctgatcatatcttcgatgggaagatacattctgca
tctaattcagacagcaattaccggatttatcttcccggttctctgtcacaagttgttctt
catgcagctcctggttatgcaccacttccaaaaccccaaagtatggttttaatccataag
acaatggaatcaaccagaggcgtagctgattcctccgatagtaataattctgatgctgaa
tctggatcttcagcaaatgagagtggctccctttatgattcagaaagtgaaggtggtgac
ttatttgacagagatggcactggatctaagcaatattcaaatgatgatggccataacctt
catcgtcaagaaggtaatcaggaagctcccctggttaatatgtacgacggtagtgtaggc
caaggccatgcaggtcaagatgatgaaaatttggcatctctcatctccacggatttaact
gaattaatgtcaaagtcagccttggagtcgtggcttgatgaggctcccactacaccgctt
gttcagaattcgatacaggcgtcatgcgcaagagtctcttttaccactcgcagctttgag
cgaaaacctaaattgcatgtattattagacccatcgaacagtaatggcttgagtgttcta
tatgccttctcatcggaggtttcacccaactcacggttgctagtatgtatagacttgttc
gttgagaatgttacaccagaccaactcgtagatataaccatcaaatctgaagaggcttct
actagtgagcatggcatggaaacatcagaaggatctgcaagcataccaactcctgttcca
atggaagagatacagtccttggctccgcaacagacagctaagagggttcttcaggttcac
ttccatcaccatatcttgcccatgaagctgtctgtcttttgcaatgggaaaagacatcca
gccaagcttcacccagacattgcttattttgtacggccactacccatggatctaaatgct
tttctgtgcaaggaaaaccagctaaggggaatgttcgaatacgctagaaggtgcaccttc
aaagatcatcttcaaaaccctgagcacactgaagacagcgcggacaacaccgacaagaac
cttcttgtagcccagagtctcgcatctaaactactcagcaacgccaatgttcacctagtg
tcgatggatatgccggtaaccttcagcatcgacgacgcctccggcctgtgctggcgattc
tgcagcgagatcctgagcaattcatacccctgcctgattaccgttgtggcagaagggcac
gcctcgggaccactggatctgaccatcaaggtgaactgtgaagacacggtgtttggcctg
aacctcctgaacagagttgtagccatcatagaatga
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