Lolium rigidum (rigid ryegrass): 124662279
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Entry
124662279 CDS
T09103
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124662279
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
Other 90S particles
124662279
Pre-60S particles
Other pre-60S particles
124662279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
124662279
NCBI-ProteinID:
XP_047056091
LinkDB
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Position
6:complement(21724663..21734846)
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AA seq
1160 aa
AA seq
DB search
MKRKQRTSAAAAAAAATEVDADEPSQALLPLDDYSGDVCAALTARYGRSASAQHRHLLAT
AAAIGSILADDGRSLTAESYLPAVVSALRAAGPSDPAAASALASLLVILIPHISSLPPAS
ASESASSLADFLASPDASKLPTGTVRSVVKSLGHLALLLEPAADWGAPLEALLAASVDQR
AKVRRCAQESVEKLFAYLERSGCGKKASSAAVGLFEKHISSVRGLAKLDADASEAKETEA
VHMLGAMAVLVPHLSKKARSTVFSGARRLLSARFSPLTRHVLRLMEALLEHLKVENVESE
LENFVSLLLAYLPYDEKKPDDTIIAALQLMKSCLAKFAGHSKLWTKALPSAFEAVSGYLI
LDRKCSEDIAKLLIECIYSHVDQSILLTNESQPDAGDSSDGAAVKSICLSINKRLKKCPA
PPLPDNVLKIVLALFLKLGECSYIFMKDILLTLSRLGTKIHKEPHLKKVEECIGAAIVAM
GPDKIHSLLPISFHEDWFTCSNTWLVPILSKYVYGASLQHFIEYIVPLAKSLRDASSRAK
KPRKCKELQAWSDQLWNLLPAFCRYPSDVYQNFGSLSKLLVEMLKCDRCLYKSACKGLQQ
LIDGTRRLTSSDQDVEIPAEISALFTSSEANNLSCVSLQRCSKKDARKSMKVLASHSVDL
LCTFADDFLDSSEKRAHLKDALRSLAQLSGSANICNLFLSLVKRFGLEDTPLEPENLECQ
TNEVDGKEEESSDATAEINNKRSLLMELIPTLAEAADEDALDLFFGFIKSSLLNNIKSCD
SRALFALSIILKEHHGYSLTQLDEIMMLLHGIKPDSNNAVLEGQLVCYKYLLVHMIKVNE
ESTSKKAFLILNELILALKSKKENRRIAYDVLLAISTSLRSSESNNGDSDLQRLFTMVMG
YLSSPSPHIVSGAIAALSLLIYNDANFCMEVPNLIPSVLVLLQNKAIEIIKASLGFVKVL
VTSLHPEKLLSLQADIMTGILPWSSFTKHHFKGKVVLILEILIRKCGFDAVNLVTPEKYK
EFVREVEEGRKGNHNPADGAEPEANDPEDPTPKRRKWGDSNAEPGQEETPKREFFVKGDR
KPHFGGARNHTDKASGGKGDRTHFRPKSNARSGNSQNYRGGKSQGRDTRPRNGAFNSTPN
RGTRQSAHSPRFKKARTAAT
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaagcagagaacctcggcggcggccgccgccgccgccgccaccgaagtcgac
gccgacgagccgtcccaggccctgctccccctcgacgactattcgggcgacgtctgcgcc
gccctcaccgcgcgctacggccgctccgcctccgcgcagcaccgccacctgctcgccacc
gccgccgccatcggctccatcctcgcggacgacgggcgctccctcacagccgagtcctac
ctccccgccgtcgtctccgcgctccgagccgccggcccctccgaccccgccgccgcttcc
gcgctcgcctccctcctcgtcatcctcatcccccacatctcctccctgccgccggcctcc
gcctccgagtccgcctcctcgctcgccgacttcctcgcctcccctgacgcctccaagctc
cccaccggcaccgtgcgctcggtggtcaagtcgctcggccacctggcgctccttctcgaa
cctgcagccgattggggcgcgcctctggaggctctcctcgccgcgtccgtggatcagcgc
gccaaggtccgaagatgcgcacaggagagtgtggagaagctcttcgcttacttggagcgc
tccggctgtgggaagaaagctagcagtgctgcagttggcttgttcgagaagcacatttcg
tcggtgagaggtcttgccaaattggatgcagacgcttccgaggctaaggagacggaggcg
gttcacatgctaggcgcgatggcagttttagttccgcatctatctaagaaggcaaggagt
acagtgttctcgggtgctcgtcggctgttgagcgcccgttttagcccgctcacaaggcat
gtcctcaggctaatggaggccttgctggagcatcttaaggttgagaatgttgagtcggag
ttggagaacttcgtctccttgctgttggcctatctgccttatgatgagaagaagcctgat
gataccatcattgcagcattacagctgatgaaaagttgtttagcgaaattcgccggtcac
tcaaaattgtggacaaaggctcttccatctgcatttgaggcagtttcaggatacctaatt
ctggacagaaaatgttctgaagatatagcaaaactgctaatagagtgcatctattctcat
gtcgaccaaagtattttgttgactaatgaatcacagcctgatgctggggattcaagtgat
ggcgctgctgtcaaatcaatctgtttgtctatcaataaaagactcaaaaagtgtcctgct
cctcctcttcctgataatgtgttaaagatcgtcctggctttgtttctcaaactgggggag
tgttcttacatttttatgaaagacatcctactaactttgtcacgacttggtacgaaaata
cacaaagaaccacacctgaagaaggttgaggagtgcattggggcagcaatagttgccatg
gggccagataaaattcattcactactcccaatatcttttcatgaggattggtttacatgc
tcaaatacttggctcgtacccattttaagcaagtatgtttatggggcctcactgcaacac
tttatagagtacattgtaccgctagcgaaatctttacgggatgcttcaagcagggcaaaa
aaaccacgaaaatgtaaagagttgcaagcttggagtgatcaattgtggaacttgcttcct
gccttctgccgctatccgtctgatgtatatcagaattttggttccttgtccaaactgctt
gtagagatgctgaagtgtgatcggtgtctctacaaatccgcttgtaaaggccttcagcaa
cttatcgatggaactagaagattaactagcagcgatcaagacgtagaaatccctgcagaa
atttcagccttgttcacgtcatcggaggctaataacttaagctgtgtaagcttacaaaga
tgctcgaaaaaagatgcccgtaaaagcatgaaagtcctggcatcacattctgtggatctt
ctttgcacttttgcagatgatttccttgactcttcagaaaagcgtgctcacttaaaggat
gctctgagatcccttgctcaactttctggtagcgcaaatatctgtaacctttttctttca
ctagttaaaagatttggtttggaagatactccattggagccagagaatctagaatgtcaa
acaaatgaggtagatggaaaagaagaagagagcagtgatgctacagcggagataaataat
aagaggtcacttctgatggaactcattcccacgctagctgaagctgccgatgaagatgcg
cttgatttattttttggattcatcaagtcttctttactgaacaacatcaagtcgtgtgac
agcagagctctcttcgcattaagcataattttgaaggaacatcatggatattctttaacc
cagttggatgaaataatgatgcttcttcatggaataaagccagattctaataatgcagtt
ttagaaggccaattagtatgctataagtatctgttggttcatatgattaaggttaatgaa
gagagcaccagcaagaaggcattcttgattctaaatgagttaatacttgcattgaagtct
aagaaggaaaatagaagaatagcatacgatgtactcctggctatcagtactagcttgagg
agctccgaatcaaataacggagattcagatcttcaacgactattcacaatggtaatggga
tatctttctagtccgtctcctcacatagtgagtggagcaattgctgcgctatcattgctt
atatacaatgatgctaatttttgcatggaagttccaaatttgataccatcagttctagtt
ctgctgcaaaataaagctattgaaataattaaggcatctttgggctttgttaaggtgttg
gtaacatctttgcatccagaaaaactattgagtttgcaagcagatatcatgactggcata
ttaccatggtcatcttttacaaagcaccatttcaaagggaaggttgtactaatactggaa
atattgattaggaaatgtggatttgatgccgttaacctagtaacaccggaaaaatacaag
gagttcgttagagaggttgaagagggccgcaaggggaatcataatccagcagatggtgca
gagcctgaggcaaatgatcctgaggatcctactccgaagagaagaaaatggggtgactct
aatgctgaacctgggcaagaggaaacaccgaaaagggaattcttcgtcaaaggggatagg
aaacctcactttgggggtgccagaaaccatactgacaaagcatcaggcggcaaaggtgat
agaactcatttcagacccaaatccaatgcacggtcaggaaatagtcaaaattacagaggc
ggtaaatcgcaaggccgcgacacgaggcccagaaatggtgcgttcaacagcacaccgaac
cgtgggacgagacagtccgcccactctcctagattcaagaaggctaggactgcagcaaca
tga
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