KEGG   Lolium rigidum (rigid ryegrass): 124662681
Entry
124662681         CDS       T09103                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03010  Ribosome
lrd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    124662681
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124662681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lrd03011]
    124662681
   04121 Ubiquitin system [BR:lrd04121]
    124662681
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lrd04147]
    124662681
Ribosome [BR:lrd03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    124662681
  Archaea
    124662681
Ubiquitin system [BR:lrd04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   124662681
Exosome [BR:lrd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124662681
  Exosomal proteins of colorectal cancer cells
   124662681
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD DUF2604 Thioredox_PDIA6_C UBL_UBAC1 Ubiquitin_5 Ogr_Delta OTU1_UBXL
Other DBs
NCBI-GeneID: 124662681
NCBI-ProteinID: XP_047056444
LinkDB
Position
6:complement(205005811..205006566)
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLALLQFYKVDDSTGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQKA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcaccttggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag
cagcggctcatcttcgccggtaagcagctggaggacggccgcaccctcgccgactacaac
atccagaaggagtcgacgctgcacctggtgctccgtctgcgcggaggcgccaagaagcgc
aagaagaagacctacaccaagcccaagaagcaaaagcacaagcacaagaaggtcaagctc
gccctgctgcagttctacaaggttgacgactccaccggcaaggtaacccgcctccgcaag
gagtgccccaacgccgagtgcggcgccggaaccttcatggccaaccacttcgaccgccac
tactgcggtaagtgcggcctcacctacgtctacaaccagaaggcgtag

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