Lolium rigidum (rigid ryegrass): 124662880
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Entry
124662880 CDS
T09103
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic-like
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00906
Carotenoid biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
124662880
Enzymes [BR:
lrd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
124662880
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GFIT
Motif
Pfam:
NnrU
PEMT
ICMT
Motif
Other DBs
NCBI-GeneID:
124662880
NCBI-ProteinID:
XP_047056618
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Position
6:35815559..35818367
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AA seq
363 aa
AA seq
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MASHLRLHLAAPPPPLLHHHRLRLPRPPKLTLLSSPAPAYSPLRPLRHRALSPAPLRASV
DRAEEGSDGEGEGLVGEDSAVFRLGDQRVLSWAYFSGILAVVLYALNVLWIDPNTGFGTS
FLDAVGSISDSHEVVLLLLTIIFAVAHSGLASFRETGEKIIGERAYRVLFAGLSLPLAVS
TIVYFINHRYDGIQLWQVQGVPGVHELVWLSSFISFLFLYPSTFNLLEVAAVDKPKLHMW
ETGIMRITRHPQFVGQVIWCLAHTLWMGNSVAVAASVGLIGHHAFGVWNGDRRLASRYGE
AFEVLKKRTSVMPFAAIVDGRQKLPADYYKEFIRLPYITITALTVGAYFAHPLMQASSYK
LPW
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccacctccgcctccacctcgccgccccaccaccgcccctcctccaccaccac
cgcctccgtctcccgcgcccaccaaaactaacgctcctcagttccccagccccggcgtac
tcccctctgcgccctttgcgccaccgcgccctttccccagccccgctccgggcctccgtc
gaccgcgccgaggagggctcggacggtgagggcgaggggctcgtgggcgaggactcggcg
gtgttccgcctcggcgaccagcgggtgctctcctgggcatacttcagcgggatcctcgcc
gtcgtgctctatgccctcaacgtcctctggattgacccgaacaccggcttcgggaccagc
ttcctcgacgccgtcggctccatctccgacagccacgaggtcgttttgctgctccttacc
atcatctttgctgtagcccatagtggtctggcaagctttcgtgaaactggtgaaaaaata
ataggggagcgagcctaccgtgtgctgtttgctggattgtcactgccgctagcagttagt
actattgtctacttcataaatcatcgctatgatggtattcagctgtggcaagttcaaggc
gtcccaggcgtccacgagcttgtttggctctcgtctttcatctcattcttatttttgtac
ccatctactttcaatctgttagaagtggcagctgtggacaagccaaaattacacatgtgg
gaaaccgggataatgcgcatcacaagacatccacagtttgttgggcaggtaatttggtgc
ttagctcacacgctatggatgggcaactcagttgctgttgcggcctccgttgggttgatt
ggtcaccatgcatttggtgtctggaatggcgacaggaggctggcgtcacgctacggtgaa
gcctttgaggttttgaagaagaggactagtgtcatgccgtttgctgcgattgttgatgga
cggcagaaactacctgcggattattacaaggagttcatccggttaccgtacatcacgatc
acagccttaactgtgggagcatactttgcacatccgttgatgcaagcgtccagctacaaa
cttccctggtaa
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