Lolium rigidum (rigid ryegrass): 124663041
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Entry
124663041 CDS
T09103
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124663041
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124663041
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124663041
NCBI-ProteinID:
XP_047056756
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Position
6:101981581..101983039
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AA seq
385 aa
AA seq
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MADITPPQAYEQLGNDPSMDDTAPPQLPNDQLGNEPAAVQDTVLMPYAAVDSSLRAMAGQ
AEGFGRHAIGGLHGDVYHVTNLHDDGPGSLRDGCRRREPLWIVFDVSGTIRLASGLRVSS
YKTIDGRGQHIILSGKGLLLRECEHVILCNLEVEGGRGHDADAVQIKPGSRHVWVDRCGL
RDFADGLLDVTCGSTDVTVSRCRFSAHDKAVLIGASSGHVGDRRIRVTIHHCFFDGTRQR
QPRVRFGRVHLYNNYTRNWGIYAVCASVESQIISQCNIYEAGDKKKVFMYMPEQAADKDR
SSGGRIRSEGDLFLNCAQEHAGDDSETAEDNPWDFEVRECYQPCSVQPASLALKELLEYR
TGWQPVPLPEDICFQGKPAVAHLNH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcacgcctcctcaagcctacgagcagctcggtaatgacccgagcatggac
gacacagcccctcctcaattacccaatgaccaactcgggaacgagccggcggctgtgcag
gacactgtgcttatgccgtacgccgctgtggattcctcgctgcgcgccatggccggtcag
gccgagggcttcggccggcacgccatcggcggcctccacggcgacgtctaccacgtcacc
aacctccatgatgacgggcccggctcgctccgggatggttgccgccgccgcgagccgctg
tggatcgtcttcgacgtgtccggcaccatccgcctcgcttcaggcctccgcgtgtcctcc
tacaagaccatcgacggccgcgggcagcacatcatcctctccggcaagggcctgctgctg
cgggagtgcgagcacgtgatcctttgcaacctcgaggtggagggcgggcgcgggcacgac
gccgacgccgtccagatcaagcccgggtcgaggcacgtgtgggtggaccggtgcggcctg
cgcgacttcgccgacggcctcctggacgtgacctgcggcagcacggacgtgacggtgtcg
cggtgccgcttctcggcgcacgacaaggccgtgctcatcggcgccagcagcggccacgtc
ggggaccgccgcatccgggtgaccatccaccactgcttcttcgacggcacgcggcagagg
cagccccgcgtcaggttcggcagggtgcacctctacaacaactacaccaggaactgggga
atctacgccgtctgcgccagcgtggaatcacagataatctcccagtgcaacatctacgag
gcaggggacaagaagaaagtgttcatgtatatgccagagcaggcggcagacaaggaccgg
agttcaggtgggcgcatccggtctgaaggcgacctgttcctgaactgtgcgcaggagcac
gccggagatgattcagaaactgcagaagataacccgtgggacttcgaggtccgggaatgc
taccagccatgttccgtccagccggcgtcattggcgctcaaggagctcctggagtaccgc
accggctggcagccggttccgttgccagaagacatttgcttccaaggaaaacctgctgtt
gcacatctgaaccactga
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