Lolium rigidum (rigid ryegrass): 124663184
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Entry
124663184 CDS
T09103
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124663184
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124663184
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124663184
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124663184
NCBI-ProteinID:
XP_047056866
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All DBs
Position
6:264879134..264882226
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AA seq
644 aa
AA seq
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MASSSSASPATAAARKKRALTEQRFSELSPAISPEVVEALKRGGFRRCTPVQAATIPLLL
SHKDVAVDAATGSGKTLAFVVPVVEMLRRLPSPPKPHQVLGIIISPTRELSSQIYNVAQP
FFATLKGVSSILLVGGLDIKAELKKVEEEGANILVGTPGKLFDIMERLDSLEYKNLEILI
LDEADRLLDMGFQKQVTSIISKLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVQVKTEA
KDAAQQDLGPSKTPLGLRLEYMICEPSKKSSQLVDFLVHNNGKKIMVYFATCACVDYWSV
VLPMLNLLKGSPVIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQ
YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPTEDSYVEFLKLRGVPLMERECSSDIVDI
VPQIRAAASEDRNIMEKGLRAFVSFVRSYKEHHCSYIFNWKGLEVGKLAMEYGLLQIPSM
PEVKHNNLSLKGFMPVSNVNFSQIKFKDKTREKQRQKVLKRKAEELAQEPPEPERRVREK
PLKPKRKQTGKQRQTIQTKEDMDELTHEYRLLKKLKKGVIDEDEYEKLTGFGDSDGGGSS
DGEDKGKERRRKVQKKLKQRGGKTRGGSARKFDGKSSKLKSRRK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctcctccgcctcgccggcgacggcggccgccaggaaaaagcgcgcgctg
acggagcagcgattctcggagctgtccccggccatttccccggaggtggtggaggccctg
aagcgcggcggcttccggcggtgcacgccggtgcaggcggcgaccatcccgctgctgctg
tcgcacaaggacgtggccgtcgacgccgccaccggctccggcaagaccctcgccttcgtc
gtccccgtcgtcgagatgctccgccgcctcccctcgccccccaagccccaccaggtgctg
ggcatcatcatctccccgacgagggaactgtcgtcgcagatatacaacgtggcgcagccc
ttcttcgcgacgctcaagggcgtgtcgtccatcctgctggtcggcgggctggacatcaag
gcggagctcaagaaggtggaggaggagggcgccaacatactggtcggcactcccgggaag
ctcttcgacataatggagcgcctggactccctggagtataagaatctcgagatactgatc
ctggatgaggcagataggctcttggacatgggcttccagaagcaggtcacctcgattatt
tcaaagttaccgaagctgaggagaaccgggctgttctccgctacacagactgaggctgtc
gaggagctggcaaaagcagggttgaggaatcccgtgagggtccaggttaagacggaggcc
aaggatgctgctcagcaagatcttggtccctccaagacgccgctggggctccggttggag
tacatgatatgtgaaccatcaaagaaatcatcacaacttgttgatttccttgtgcacaac
aacggaaagaaaatcatggtctattttgcaacatgtgcctgtgtagattactggtctgtt
gttcttccaatgctcaacttacttaaaggttctccagtaataccttaccatggaaagatg
aaacagggccctcgtgagaaagctctggcgtcattttctgctctttcaagtggtatttta
gtctgcactgatgttgcagcaaggggtcttgacataccacatgttgatctaattgtgcag
tacgatccacctcaagatcccaatgttttcatacatagagcaggtcgcactgcccgctat
gatcaagaaggagatgctattgtatttctcttgccgacggaggattcttatgttgaattc
ttaaagcttcgaggtgtacctctcatggaaagggagtgttccagtgatattgtagatatt
gtgccacagatcagagcagctgcatcagaagatcgtaatatcatggaaaaggggcttcga
gcttttgtatcatttgttcgttcatacaaggagcatcactgctcgtacattttcaattgg
aaaggacttgaagtaggaaagctggccatggagtatggcttacttcagatcccatccatg
ccagaagtgaagcacaataatctttcactgaagggatttatgcctgtcagcaacgtcaac
ttttcacaaatcaagttcaaggacaaaactcgagagaagcaacgccagaaggtactgaaa
agaaaagcggaagagctagctcaagagccacctgagccagaaaggagagttcgggagaag
cctcttaaaccaaagcgcaagcagacgggcaagcagcgacagacgatccagaccaaggag
gacatggatgagctgacgcacgagtaccggctcctgaagaagctgaagaagggtgtgatc
gatgaggatgagtacgagaagcttaccgggttcggagactcggacggcggaggttcttct
gatggggaggacaaagggaaggagaggcgcagaaaggttcagaagaaactcaagcagaga
ggagggaagacgagaggagggtctgccaggaaatttgatggaaagagtagtaagctgaag
agcaggagaaaatga
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