Lolium rigidum (rigid ryegrass): 124663369
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Entry
124663369 CDS
T09103
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03430
Mismatch repair
lrd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124663369
03460 Fanconi anemia pathway
124663369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124663369
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124663369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124663369
NCBI-ProteinID:
XP_047057035
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Position
6:complement(20735798..20742742)
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AA seq
723 aa
AA seq
DB search
MDVDDPTPRGGGEPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSIDAGASTVSVTV
KDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTITSMGFRGEALASMTYVG
HVTVTTITEGQLHGYRVSYRDGVMENDPKPCAAVKGTQVMVENLFYNMVARRKTLQNSND
DYPKIVDFISRFAVHHINVNFSCRKHGSNRADVHSASTSSRIDAIRNVYGASVVRDLMEI
EVSDENAVDEIFRMDGFISNANYVAKKTTMILFINDRLVDCTSLKRAIEFVYSAILPQAS
KPFIYMSINLPPEHVDVNIHPTKKEVSLLNQERIIEMIKDAIEEKLMNCNTTRIFQTQAV
NTSALTQASTQKEKGTEVSTPTGAKSQKIPSQMVRTDPRDPSGRLHTYWHGQSSNLEKKS
DLVSVRNVVRSRRNPKDAGDLSSRHELLTEIDTNLHSGLLDIVKNCTYVGVADEVFALIQ
HNTRLYLVNVVNVSKELMYQQALCRFGNFNAIQLSEPAPLRELMMMALKDDESISDENDK
EKLEIAEVNTEILKENAEMINEYFSIHIDQSGNLTRLPVVLDQYTPDMDRLPEFALTLGN
DVTWDVERDCFRTAAAAIGNFYALHPPILPNPSGNGIQLYKKNKDCMASGERDNDSTNTD
EDEIDQELLAEAEAAWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYKIF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacgacccgacgccgcgcggcggcggggaaccgccccgcatccggcggctg
gaggagtcggtggtgaaccgcatcgccgcgggggaggtgatccagcggccgtcctcggcg
gtgaaggagctcgtcgagaacagcatcgacgccggcgcgtccaccgtctccgtcaccgtc
aaggacggcggcctcaagctcatccaggtctccgacgacggccacggcatccggtttgag
gacttgccaatactgtgtgagaggcatactacctccaagttgtctgcatacgaggatctg
cagacgattacatccatggggttcagaggagaggctttggccagtatgacttacgttggc
catgttaccgtgacaacaataacggaaggccaactgcacggctacagggtgtcatatagg
gatggagtaatggagaatgacccgaagccatgtgctgcagttaaaggaactcaagtcatg
gttgaaaatttattttacaatatggtagctcgcaggaaaacattgcagaactccaatgat
gactatcccaagatagtggacttcatcagtcggtttgcagtccatcacatcaacgtgaat
ttctcgtgtagaaagcatggatccaatagagcagatgttcatagtgcaagcacgtcttca
aggatagatgctatcaggaatgtctatggggcttctgttgtccgtgatctgatggaaata
gaggtttcagatgagaatgctgtagatgaaatattcaggatggatggtttcatctcaaat
gctaactatgtggcaaagaagactactatgattcttttcataaatgataggcttgtagac
tgcacttctttgaaaagagctattgaatttgtgtactctgcaatattgcctcaagcatct
aaacccttcatatacatgtccatcaatcttccaccagaacatgtggatgtcaatatacat
ccaaccaaaaaagaggttagcctcttgaatcaagagcgtattattgaaatgattaaagat
gctattgaggaaaagctgatgaattgtaataccacaaggatattccaaactcaggcagta
aatacttcagcacttactcaagctagcacacaaaaggagaaaggtactgaggtcagcacg
cctactggagcaaaatctcaaaagattccgagccaaatggtcagaacagatccacgtgat
ccttctggaaggctgcacacttattggcatgggcaatcttcaaatcttgaaaagaaatct
gaccttgtttccgtaagaaatgttgtaagatcaagaagaaatccaaaagatgctggtgat
ttgtccagtcgtcatgagcttcttacagaaatagatacaaatttacattctggacttctg
gatattgttaagaactgcacatatgttggagttgcggatgaagtcttcgctttgatacag
cacaatacgcgcttataccttgtgaatgtggtaaatgttagtaaagaactcatgtaccaa
caagctttgtgccgttttggaaacttcaatgctatacaactcagtgaaccagctccgctt
cgggagttgatgatgatggctctgaaagatgacgaatcaattagtgatgaaaatgacaag
gagaaactggaaattgcagaagtgaacactgagatcttgaaagaaaatgctgagatgatt
aatgagtacttctctattcacattgaccaaagcggtaacttgaccagacttcctgttgta
cttgatcagtacacgcctgatatggatcgtcttccagagttcgcgttaactttgggaaat
gatgttacatgggatgttgaaagagactgcttcaggacggcagctgctgctattggaaac
ttctatgcacttcatcctcccatccttccaaatccatctggcaacggcattcagttatac
aagaaaaataaagattgcatggcaagtggtgaacgtgataatgattcaacaaatacagat
gaagatgagattgatcaagaactgctcgcggaagccgaggcagcatgggctcaacgcgag
tggaccattcagcatgtcttgtttccatccatgcgacttttcctgaagcctccgaagtcg
atggcaaccgatggaacgtttgtgcaggttgcttctctggagaaactttacaagattttt
gaaagatgctag
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