Lolium rigidum (rigid ryegrass): 124663619
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Entry
124663619 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124663619
KO
K24155
rabconnectin-3a
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124663619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124663619
Membrane trafficking [BR:
lrd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124663619
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
124663619
RAVE complex
124663619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_VPS8
MJ1010-like_2nd
Motif
Other DBs
NCBI-GeneID:
124663619
NCBI-ProteinID:
XP_047057254
LinkDB
All DBs
Position
6:complement(183234514..183252142)
Genome browser
AA seq
2436 aa
AA seq
DB search
MRELPQLPLALHPPHLIPPAPTPDHRALSFLNDLGGLSWVAYAAGSLLAISHLPSPPRTS
GSATTDEESPFFRQVIDLQAPVSAVAWCGHGGGELAAASANSVSFFQPAPSSSAGSFSWL
LRWAITETFTVTAVAWTGSGDGIVLAGEGVSMWAKTQSSWQLAWRSMPQVPQSLVSATYF
IHGPVVAASAAAPSEGNVPVLVFLNGAKLGLDTAELPHPQPVSMIQWRPLAICADDRSEV
RREILMTCCLDGTARLWTEDEVTRSKKHRALPRSFSVIAVIELNNVLNGVLGVDLTVRWV
VETGRSVSQEDQGKFNLFSGDPSESKVGKCEWLVSIGPGQCTNFWAVHCLDDVCPPRYPR
ITLWKQSKPHEESAINLGSPGSFFVEAVISRRICSGPPTTCSLLHLLPDSSFIWSRLSFG
PSSDTGTHISNDSSKTISCCSTKTINQAGHKGSIIEVSIHPYSCEIELAVSMDSSRVLFL
WSLSTLSTLLPTLHASTYPLWKLLCKFDLRDISADVHYSCLCWAPSVLCDTRFLVLGGEN
GADCFVVRIPKEGDVFSCHKMFTVPFLRGSNTEGPPDSIHTIPLASNCSKPFFNNSFLVV
CVWRKSFQALSWKIILHSEKRHEEEGCLCDLSASSLSTADQGRHVTSVRGEKFSAVIYEG
SSVFPTGLDGEYPTCISVMSLNNAVLPLQQHVPSGAFPGYHIATGYSDGTVKLWKMFGVD
DPEQTGRESNTWELVGMFSAHRGPISTISLSRCGRVATVGRNVQKNSTSIHIWEAVKLMG
DGCFLLEDALMIQSPVVGLDWLSLGDGRFLLAVCFHNELHIYSQRHPSFENVLHAVSLEN
KHIWSCIALAHSHHDVAGFHWGPKSTILLVHKNHLSLFSSWLVRGANEHITRKGFSCATD
VHEELPCIVHFNGTIFGKLGLSENHINMETIENNCTLLPDQHNIHSPNVLWSLLDISGIL
SGPLPSYHPRALIQYLYSGEWKRADGVLQHLVQSMKTSKNLDTMFNCSSCSKSCHNIPDI
PLPQYFTDTPSSDISSKGLLWGDNRSSTAFNLLSPSNSFSYMASDLGINTITSVSQKSEI
NQLLDKSFGMLAISDSERIQILTVSDLLAEITDQNRASPYKSLDEAGRRFWIAVQFQRLY
ALRRSGDSSSVEGRHVDSASIAWAFQSDCQDDLLNYVLPAESTWSEMQKLGMGLWYTNVS
QLRTRMEKLARLQYLKSKDPKDCALLYIALNRMKVLVGLFKVSRNEKDKRLYEFLCRNFE
EEKNKAAALKNAYVLLGRHQWELAIAFFLLGGDASSALNVCAKNLQDEQLALVICRLVEG
SGGPLERNLISNVLLPDAAEKGDHWLSSLLEWMLGNYSQSVSKLFGCHPKLLLDESNTRG
GQNVFADPELGQYCAILATKHSFRNSVGEALSAKLSKLSFALAACALNRCGLPLEALECL
SCKSSIDYKDSTSSPHGAHDKILDGILNPFDASSNWLSSMVVSDFESNLRVSMASKYLSR
MLRNHSLCSECSLPLNKDMALKEQSSHSIEELTRDVTAAISIFDKRFSLQFSDIAEKILT
FCCNDGILFLAYILLLGRRTPDGGTNSHGVEGCSVRPTDYLLLVSCKESCKFLTRYLVSC
CFISSTLNTDFTKFTACTPKENIKYTIASLSHFLSTSRLLLKQGHGRTSGLDTTSALSTV
MDLLEYNMEFSVSWLCRDIKALLIMINPVLGASINEESLQVLLDQLMQAAQRRSHGISIN
TDAVMPNGPFDMKQPETSEDSSLSIDEKWHLIGMSLWIGLSSFMKHHLTEFIGKERPELE
ASTSDVELKGLISSVGAKLVIDSLHFVSSSLVKLHASFFRQKLSKNVHLSVPFWLEYMSS
QQRSEKTRHDQFAHIVQCVNTENMEVLFNILWEISANPVDICTAFVNEEVNCFPLNSTKL
SRSWKDMVRNGGENKCSISSENNEEGRGFIDKASSDVNTLEPKRKYLIAQNDFQSPRELL
RRNGELLEAICLNSINEQHAAIATNRKGLVFFNWYDKQHDKKPAEYIWSGSDWPSDGWAC
SESTRTPTPAATPISPSVGLGRRGQHLGSDGVTIGVGSLAKPGRDLTGGGAFGIPGYAGI
GASGFGWGEPDEFEDFVDPPATLENIHSRALSRHPSLPFLLVGSSNTHVYLWEFGKDSAT
ATYGVLPATSVPPPYALASISAVQFDYYGQRFATAALDGTICTWQVEVGGRSNVHPTESS
LCFNGHASDVAYVDASGSILAAAGCNSNAANVVVCDMLAPPATCQNSIVCHEGGARSLSV
FDNDIGSGTISPLIVTGGKSGGVALHDLRFISTGKSKHHKTTAGGSSIGMIWHIPKAHLG
SVTSLSTIPNTTLFLTGSKDGDVKLWDANNSQLVFHWQKLHERHTFFQPTSRGFGGVVRA
GVTDIQVLRNGFVSCGGDGSVKLVQLKNDFAAVNLL
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgagggagctgccgcagttgccgctcgccctccacccgccgcatctgatccctccggcg
cccacccccgaccaccgcgctctctccttcctcaacgacctcggcggcctctcctgggtc
gcctacgccgccggctccctcctagccatctcccacctgccctccccaccccgtaccagc
ggaagcgctaccaccgacgaagaatccccattcttccgccaagtcatcgacctccaagcc
cccgtctccgccgtcgcctggtgcggccatgggggaggcgagctcgcggccgcgtctgcc
aactccgtctccttcttccagcccgcgccctcgtcttctgcaggttccttcagttggctt
ctgagatgggccatcaccgagacgttcacggtcaccgccgttgcctggacgggctctggc
gacggcattgtgctggccggtgagggcgtttccatgtgggccaagacacagtcctcctgg
cagctcgcttggaggtccatgccacaggtgccacagtccctcgtttctgctacctacttc
atccatggccctgtcgtagccgcttcagctgctgctccttccgagggcaatgtgcctgtt
ctggtctttctgaatggtgccaaactggggctcgacacagctgagcttccgcatcctcag
cctgtttccatgatccagtggagacctttggcaatatgtgctgatgatcggtctgaagtg
aggagagaaatcctcatgacttgctgcttggatggaactgcccgcctatggactgaagat
gaggtgaccaggtcgaagaagcaccgtgcactgccaagatctttcagtgtcattgcagta
atcgagttgaacaatgttctaaatggagtgcttggtgttgatttaactgtgagatgggtg
gtagaaacaggaagatccgtatcgcaagaggaccaaggtaaattcaacttgttttcaggt
gatccctcggagagcaaggttggcaaatgtgagtggctggtaagcattggtcctgggcaa
tgtaccaacttttgggctgttcattgtcttgatgatgtatgtccaccaaggtacccacgg
attacgctatggaaacagagcaaaccacatgaggagtctgctattaacttgggttccccg
ggatcattttttgttgaggctgtcatatcaagaaggatatgttctgggccacctacaaca
tgctccctgcttcatttgctgcctgatagttctttcatttggtcccgcctgtcttttggc
ccatcatcagatactgggacccatatttcaaatgattcttctaaaacaatctcatgttgt
tcaaccaaaactattaatcaagctggacataagggtagcatcatagaggtgtctattcat
ccatacagctgcgaaatagagctagctgtttctatggattctagcagagtactatttctc
tggtctctttcaaccttatcaactctcttaccgaccttgcatgcatccacttatccttta
tggaagctcctgtgcaaatttgatctgcgtgacatttctgcagatgtgcactactcatgt
ctgtgttgggcaccttctgttctctgtgatacaaggtttcttgtcttgggaggtgaaaat
ggagccgattgttttgttgtcagaatcccaaaggaaggcgatgttttctcatgtcacaag
atgttcacagttcctttccttcgagggagtaatacagaagggccacctgacagcattcat
accatacctttagcttctaactgcagcaaaccttttttcaacaacagcttcctagtagta
tgtgtatggcggaagagttttcaagctttatcatggaaaataatcctgcattcagaaaag
cgccatgaagaagaggggtgtttgtgtgatctttctgccagttcactttccactgcagat
caagggagacatgttacttccgtccgcggtgaaaagttttcagctgttatttatgaaggt
tcttcggttttccctactggcctggatggagaatatcctacctgcatttctgttatgtcg
ctcaataatgctgtattacctctacaacagcatgtaccttctggagctttcccaggttat
catattgctaccgggtactctgatggcactgtaaaactttggaagatgtttggtgtagat
gacccagagcagactgggagagagagcaacacctgggagctagttggcatgttcagtgct
catcggggaccaattagtacaatttcactatccagatgtggcagagttgctactgttggc
agaaatgttcagaagaatagtacctccattcatatctgggaagcagtaaaactcatggga
gatggttgttttctcctggaagatgcactaatgattcaaagccctgttgttggtttagat
tggctatctttaggcgacggtagattcttacttgcagtctgttttcataacgagttgcat
atatattcccagaggcacccctcatttgagaatgtgctgcacgctgtgagtttggaaaat
aagcatatttggagttgtattgcattagcccattctcatcatgatgttgctggcttccat
tgggggccaaagtcgacaattctgcttgttcataagaatcatctttcactcttcagttca
tggttagtaagaggagcaaatgagcatattacccggaaaggtttttcttgtgctacagat
gtgcatgaagagttgccatgtattgtgcattttaatggaactatctttggtaaacttggg
ttatcagaaaatcacatcaacatggagactattgagaacaactgtacactgttaccagat
caacacaatattcattctcctaatgttttgtggagcttgttggatatatctggtattctg
agtggacctttgccatcatatcacccaagagcacttatccagtatctttattcaggtgaa
tggaaacgtgcagatggtgttctgcagcatcttgttcaatccatgaaaacgagtaaaaat
ttagacaccatgtttaactgcagttcgtgcagtaaatcctgccataatatccctgacatt
cctttgccgcagtactttactgatacaccatcaagtgacatttctagcaaagggttactg
tggggtgacaatagaagtagcacagcctttaatttgctgtcaccatcaaattcattttct
tacatggcaagtgatttaggtatcaacactatcactagtgtatctcaaaagtcagagata
aaccagctgcttgataagagctttggcatgttggcgataagtgacagtgagagaatacag
atacttacagtttctgatctgttggctgaaattactgatcagaaccgcgcttctccctat
aaaagccttgatgaagcaggacgaaggttctggattgctgtgcagttccagcgcctatat
gcgcttaggagatctggagattcatcaagtgttgaagggcgccatgttgattctgcttca
attgcatgggccttccaatctgattgtcaggatgatctacttaattatgtccttcctgca
gaatcaacttggtcagagatgcaaaaacttggtatgggattatggtataccaatgtgtcc
cagctaagaaccaggatggagaagttggcaaggttgcagtatcttaaaagcaaggacccc
aaggattgtgctctgctttatatagcattaaacagaatgaaagtgttagttggcctattc
aaggtcagcagaaatgaaaaagataaacgtctgtatgaatttctctgcagaaactttgag
gaagaaaaaaacaaagccgctgctcttaagaatgcttatgtactactgggaaggcatcaa
tgggagcttgctatagcatttttcctgcttggaggtgatgcttcctcagctctcaatgtt
tgtgccaagaatcttcaagatgaacagcttgctcttgtaatttgtcggcttgttgaggga
tctggagggcccttggagcgtaacctcatttcgaatgtgctgctccctgatgcagctgag
aaaggagaccactggctctcaagcctgcttgaatggatgctagggaactattctcagtct
gtcagtaaattgtttggctgccatcccaagctactgttggatgaatccaacactcgtggt
ggtcaaaatgtgtttgcagacccagaattgggtcagtattgtgcaatccttgcaacgaaa
catagtttcagaaacagtgttggtgaagctctatctgcaaagttatccaagctttcattt
gcactggctgcatgtgccttaaaccgatgtggactacctcttgaagcacttgaatgccta
tcttgtaaatcaagcatagattacaaggacagcaccagctcaccgcatggtgcacatgac
aagattcttgatggaatactgaacccttttgatgcttcttccaattggctttcatcaatg
gttgttagtgattttgaatcaaatctaagagtaagcatggcttcaaaatatttgtcgcgc
atgctaagaaaccactctctctgttccgaatgtagtctaccactaaataaagacatggcc
cttaaagagcaaagcagtcatagcatcgaagaacttacacgtgatgttactgctgcaatt
tcaatatttgataaaaggttctcactccaattttctgatatagccgagaagatccttacc
ttctgttgcaatgacggtatactgtttcttgcatacattttgttattgggtcgtagaaca
ccagatggtggaactaatagtcatggtgttgaaggttgctctgtccgtccaactgactat
cttttgttggtgtcatgcaaggagagttgtaaatttcttactcgatatcttgtctcctgc
tgcttcatctcctccactcttaatacagacttcaccaaatttactgcatgcacacctaag
gagaacattaaatacactatagcaagtttatcacatttcctgagtactagcaggttactc
ctgaaacagggccacggtagaacttctggattggacactacatcagctctatccactgtt
atggatctccttgagtacaatatggagttttctgtttcttggctgtgccgtgacataaaa
gcgttacttatcatgatcaatccagtgttaggcgcttctatcaatgaagagtccttgcaa
gtactattagatcagttgatgcaagctgcacaacgtagaagtcatggtatatcaattaac
acagatgcggtaatgcctaatggtccatttgacatgaaacaaccggaaacaagtgaggac
tcaagtctttcaattgatgagaaatggcatttgataggcatgtctttgtggattggactg
tcatccttcatgaaacatcatttaactgagttcattggaaaagaaagacctgaacttgaa
gctagtacaagtgatgtggaattgaagggtctcatctcttcagttggcgcaaagcttgtt
attgattccctgcattttgtgtcatcttcgttggtaaaacttcatgcatcatttttcaga
cagaagttatcaaagaatgtacatctaagtgtgcctttctggttagaatatatgtcgtct
cagcaaaggtccgaaaagactaggcacgatcagttcgcacatatcgtacagtgtgtaaac
actgagaacatggaggtgctatttaatattttatgggaaatatctgctaaccctgttgac
atttgcactgcctttgtgaatgaagaagtcaattgctttccgctaaacagcacaaagctc
agtagatcttggaaggatatggtcagaaatggaggagaaaataaatgcagcattagctct
gagaacaatgaggaagggcgtggatttattgacaaggcttcttctgatgtgaatactctt
gaaccaaaaagaaaatacttgatcgcacaaaatgattttcagagcccaagggaactttta
aggagaaatggggaactccttgaggcaatatgtctcaactcaatcaatgaacagcatgct
gctattgctaccaaccgaaagggtcttgtatttttcaactggtacgacaagcaacatgac
aaaaaaccagcggagtatatttggtcaggttctgattggccatcagatggctgggcttgt
tctgaatccacacgtacacctacacctgctgcaactcctatttcacctagtgttggtctt
gggagaagaggacagcatcttggttcagatggagtgactataggtgtaggttctttggca
aaacctggacgagacttaactggtggtggagcatttggaattcctggttatgctggtatt
ggggcctctgggtttgggtggggtgaacccgacgaatttgaggattttgttgatcctcca
gcaacacttgagaacattcattcaagagcactatcacggcatccttctctgccatttttg
ctagttgggtcaagcaatacacatgtgtacttatgggagtttggtaaagatagtgcaaca
gctacttatggtgttctccctgctactagtgttccaccaccttatgcacttgcttccata
tcagctgttcaatttgattattatgggcagcggttcgccactgctgcattagatggtaca
atttgtacgtggcaagttgaggtgggtggaagaagcaatgtacatcccacagagtcatct
ctgtgctttaacggccatgcctcggatgttgcttatgtggatgcaagtggatctattctt
gctgcagctggatgcaattcaaatgctgcaaatgttgttgtctgtgacatgctagctcca
ccagccacatgtcaaaattctatcgtgtgtcatgaaggaggagcacgttctctttctgtg
tttgataatgatataggctctggaaccatctcaccgctgattgtaactggtgggaaaagt
ggaggtgtggcattgcatgatctccggttcatttctaccggaaagagtaagcatcacaaa
actaccgctggtggtagttctattgggatgatttggcatataccaaaggctcatttagga
agtgtcaccagtttatcaaccattccaaatacaaccctgttcttgactgggagcaaagat
ggggatgtgaagctttgggatgcaaacaattcccagctggtctttcactggcaaaagttg
catgagcggcacacattttttcaaccaacctccaggggctttggtggtgttgttagggct
ggtgtaacagatattcaagtcttacgtaatggctttgtttcgtgtggtggtgatggatct
gtgaagcttgtacagttaaagaatgattttgctgcagtaaatctgctctag
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integrated database retrieval system
