Lolium rigidum (rigid ryegrass): 124663620
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Entry
124663620 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP98B-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124663620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124663620
03036 Chromosome and associated proteins [BR:
lrd03036
]
124663620
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124663620
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124663620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
124663620
NCBI-ProteinID:
XP_047057256
LinkDB
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Position
6:complement(183996268..183999327)
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AA seq
486 aa
AA seq
DB search
MPVYNSKSHEELRHEDYQRGDKGSPSLPKSMVPSANHPWQPQPPVQLLEDLSDAHAKPSV
VPQSTTQGFGCNTNNPFWLHSAGPQPPVFSFPPSSSAPAGPPLFSVPLSNHPWQPQPPVQ
PLKYPSEAHVKPSVGPQSTTQGFGCNTNNPFWLRSAGPQPPVFSFPPSSSAPATSRENIF
SNTASYRAPDTSFTQGGSLLSSSVSHSAPAPSPNGQCTSINIDHSKKAVELLLPIDITTV
RIRFYPRNDDTGSLASQVHNVQASPTPVSFSIYPGENQDLTIRSVEQPASQTGKTSSSTG
PAGEQKGNISDVPLTDRSPFGAPGCEVISESVLPRLYKADYYTLPSIAELAARERQEPGS
CSHVKDFTVGRHGYGSVKFDGETDVRMLDITSIVEFKDREINAYMDESKRPPVGQELNKP
AEITLLNVKCVDQKTGLQLMEGPAVDAYKEVLAQWTKSHDAEFISFDPVKGSGSLVLRNS
NLFLFL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtatacaacagcaagtctcacgaggagcttcgacatgaagattatcagagagga
gacaaagggagtcccagcctgccgaaaagcatggttccttcggctaatcatccatggcag
ccccagcccccagtgcagcttttggaagatctaagtgatgctcatgcgaagccatctgtg
gtaccacaatccacaacacaaggtttcggttgtaacaccaacaacccattttggttgcac
tctgcaggaccccagccaccagtgttctcatttcctccttcaagctccgctcctgcaggc
ccaccattattttcggttcctttgtctaatcatccatggcagccccagcccccagtgcag
cccttgaaatatccaagtgaagctcatgtgaagccatctgtgggaccacaatccacaaca
caaggtttcggttgtaacaccaacaacccattttggttgcgctctgcaggaccccagcca
ccagtgttctcatttcctccttcaagctccgctcctgcaacttctagggaaaacatattc
agtaacacagcgtcatatagagctcctgatacatcgtttacccaaggaggaagtttactc
agctcttcagtctcccattcagcaccagctccgtcaccaaatggtcaatgcacttctata
aatattgatcattccaagaaagctgtagagttgctactaccaattgacattactactgtc
aggattagattttatccaaggaatgatgatactgggagccttgcttcacaggttcataat
gttcaagcttcaccaacacctgtttctttctctatctatcctggagagaaccaagacctg
actatccgatcagtggagcagcctgcgagtcaaactgggaaaacatccagttcaacagga
cctgccggggaacagaaagggaatatcagtgatgttcccctgactgacagatctccattt
ggtgcccctggctgcgaagtgatcagtgagagtgtgctacctcggctctacaaggccgac
tactacaccttgccatcaatcgcggagcttgctgcacgagaacgtcaggagccaggtagt
tgctcacatgtgaaggacttcacagtcggcagacatggctatggcagcgtgaagtttgat
ggagaaactgatgtgaggatgctagacatcacatccatcgtggagttcaaggaccgtgag
attaatgcctacatggatgagagcaagagacctcctgttgggcaggagctcaacaagcct
gcagagatcactcttctgaatgtgaaatgtgtcgatcagaagactgggttgcagttaatg
gaagggccagcagtcgatgcatataaggaggttctggcgcaatggaccaagagtcacgat
gctgaattcatatcgtttgatcccgtgaaggggagtggaagtttagtgttaagaaactct
aatctgtttctgttcttgtaa
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