Lolium rigidum (rigid ryegrass): 124663637
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Entry
124663637 CDS
T09103
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124663637
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124663637
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
124663637
NCBI-ProteinID:
XP_047057265
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Position
6:187056577..187059143
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AA seq
666 aa
AA seq
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MATTTRLILLVITVSLLVLQVAAVPAAAALGGGVTLHVDRKQVMVDNGVVQLTLSRPAGR
ITGVRYGGEGNLLHYSKGKGGKNTGGYWDMVWNIPGAQQGLSTTLDGSEFRVVTQTEEQV
ELSFRSTYDPARGNGVRLNIDKRFVVLKGSSGFYTYAILEHAADTPAIDISLARIAFKLN
TERFNYMAVSDGIQRYMPRDSDREAPRSSPLAYREAVLLVDPSDPQFKGEVDDKYQYTLD
SKDNRVHGWVSSGHPNPIGFWLVTPSNEFKSGGPLKRDLTSHVGPTCLSVFHGSHYVGDD
IAARIKDGEYWKKVMGPVFVYLNSNPPKGDPRALWEDAKAAAEAEAAKWPYSFPESPDFH
KAGERASVTGRLLVTDSHVNMPARAAYVGLAAPGQPGSWATESKGYQFWTRASNTSGEFS
IDNVRAGDYNLYAWVPGVLGDYMHTTRVTVTPGHAINLGDLVFEPPRSGPTLWEIGVPDR
SAAEMFIPDTDPKYPTNKLFLNNDKYRQYGLWERYAELYPTDDPVYTVGESHHSKDWFFA
HVTRKVGDSIVPTTRQIQFHLDHVVPDGTYTLRVALAAAHMSRLQVQVNGAARRGAGTFG
TPAFGDGNAIARHGDHGTQWSFEFPIRGSLLRQGDNAIQITQTRALSIFFGVMYDYIRLE
GPAGSR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgacgcgtttgatcctgttggtgattaccgtgtctctgctggtgctacag
gtcgccgccgtgccggcggcggcagcgctgggtggcggcgttacgctgcatgtggatcgt
aaacaggtgatggtggacaacggcgtggtgcagctgaccttgtcgaggcctgcggggcga
atcaccggcgtccgctacggcggggaaggaaacctgttgcactactccaagggcaagggg
ggcaaaaacacaggcggctactgggatatggtctggaacatccccggggctcagcaagga
ctctccaccacgcttgatggctcggagttcagggtggtgacccaaaccgaagagcaggtg
gagctgtccttcaggagcacctacgaccccgcacgcggcaacggcgtgcggctcaacatc
gacaagaggttcgtggtgctcaagggcagctccgggttctatacctacgccatcctggag
cacgccgcggacacgcccgccatagacatcagcctcgcccgcatcgccttcaagctcaac
accgagaggttcaactacatggccgtctccgacggcatccagaggtacatgcccagggac
agcgatagggaagcgcctcgcagctcgccgctcgcctacagggaggcagtgctgctcgtc
gacccctcggacccgcagttcaagggggaggtggacgacaagtaccagtacaccttggac
agcaaggacaacagggtgcacggctgggtcagcagcggccaccccaaccccatcggcttc
tggctcgtcacccccagcaacgagttcaagagcggcgggccactcaagagggacctcacc
tcccacgtcggacccacctgcctcagcgtgtttcatggatcacactacgtcggagacgac
atcgcggcacgcatcaaggacggcgagtactggaagaaagtcatggggcccgtcttcgtc
tacctcaactccaacccgcccaagggtgacccgcgggcgctctgggaggacgccaaggcg
gcggcggaagccgaggcggccaagtggccctacagcttcccggaatcgcctgatttccac
aaggccggcgaaagagcctccgtcaccggcagattactggtcacagacagtcacgtgaac
atgcctgctcgggcagcttacgttggcctcgccgctcctgggcagccgggctcctgggcc
acggagagcaagggctaccagttctggaccagggcgtccaacacttccggcgagttcagc
atcgacaatgtccgggcaggagactacaacctctacgcgtgggtccctggagtcctcgga
gactacatgcacaccacacgtgtaacggtcacacccggtcatgcaatcaaccttggcgat
cttgtgttcgagcctccgagatccggaccgacgctgtgggagatcggtgttcctgatagg
agcgcggcggagatgtttatccccgacaccgaccccaaataccccaccaacaagctcttc
ctcaacaatgacaagtacaggcaatatggtctatgggagaggtacgccgagctgtacccg
acagacgatcccgtctacaccgtcggcgaaagccatcactccaaggactggttcttcgcg
catgtcacaagaaaggtgggcgacagcattgtaccaacaacgcggcagatacagtttcac
ctcgatcatgtggtgccagacggaacctacaccttgcgcgttgctcttgcggccgctcac
atgtccagattacaggtccaggtgaacggagcggcgagacgtggtgcgggaacctttggg
acgccggcgttcggcgacggcaacgcgatcgcccggcatggcgaccacggcacgcagtgg
agcttcgagttcccaatcagggggagcctgctccggcaaggcgacaacgccatccaaatc
acgcagacgagagcactcagcatcttcttcggggtcatgtacgactacatacggttagaa
ggacctgccggttctcgctag
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