Lolium rigidum (rigid ryegrass): 124663772
Help
Entry
124663772 CDS
T09103
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124663772
03036 Chromosome and associated proteins [BR:
lrd03036
]
124663772
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124663772
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124663772
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124663772
microRNA pathway
RISC loading complex
124663772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF4283
zf-CCHC
HypA
Motif
Other DBs
NCBI-GeneID:
124663772
NCBI-ProteinID:
XP_047057392
LinkDB
All DBs
Position
6:complement(219735325..219779023)
Genome browser
AA seq
1506 aa
AA seq
DB search
MVELAVAMVVDGGTAVEVTSVLAMEIISLKEVLVVLLVRVMGIGTQSIVTEVLMVSFVLV
MGIQREIEEDPIMGIMGRGIIVLEIVARIPAKGTLHNGGPTMELVPVILGLIAMPGQQAS
SQMFKVDDAATDQQSAEVQMAKKKKGFGCFRCGQVGHCLNDCKATICECCQSTEHISRNC
PLLSAPKPNMVMYGLAHEELMFWDIHMSTNVRPRLENTRMERVTISGGELTIPEIIVQLQ
WIVPDEAYQWDVVRVEDNVYCVNFPSKMDLVRVQHFGRFNIPNSEIYMTFDFWKRSVEPI
WRAHEVWVRVYDLPTLVLDDYLAMWAIGNLFGKTTDIDITFTRANDVLRMYIICLDPSLI
PARMDIRVLDDFYRMRFEVEGAQPVRAADVVMNEANNGEGDMEHDGPNGNIEQPGSVDEN
NSVDQQDGHNCTTNLPTDAQGQRLALSPFQFGVAGSEIVVNGGIFVAVPKSPTVIFSAEI
EKRLKGFECVKSLASEFSAEVTNRVQLQNLSSHVPADSFYVADTSIGPTEHSPAQSDTQE
NQPAVQPSMHVAMQGSSIGGTDAAASYIAPCIVPTPVGVSEIVAESPRRQPSLDEMESQS
GKGDPSKPPASDGGKGDPSKSPVSDGGKGGSSMTAKPQRLPIKRPTQHATKGRPVMLLTN
HFKVSLTRTDQILYHYDVTLKYDDGELGEGVRRKVMKQLYETYASHLAHEVFAYDGEKGL
FTVGPLPFKNNVFDVVLCDDASSGKTGTSRSPGGDGSPGPSDKKRMKRAVYPKRFKVEIA
STSAARIPMSAIAQVLRGGQESENSQEAIRVLDIILRQHSARQGCLLVRESFFHSEFGSI
DVGSGVIGCRGFHSSFRPTQNGLSLNFDLSTTIVVRHGPVIDFLLFNQNIKDCKRIDWGK
AKRALNNLWIKTTHRKAEFKIVGLSEKRCYEQKFSRKQGEGNGTVEVTVYDYYMDRWSIK
PDNSADLPCLIVGEPDRPTYLPLELCHLLPLQRYKKSLSTLQRSKLVEGSRQKPRDRMST
LSRALRDNNYDTEPMLRECGISISRDPMKVEGRVLQAPQLSVAHGRELYTPNGRWNFNND
RFIRPIKVTTWGVVNFSARCNVSDLIRRLMESAHKKGIQIDNCGAIIEEGGDMRRERPAK
RVEAMFKQIQDISNQKPAFLLCLLPEKNCDIYGPWKRECLAEHGIFTQCLVPPANIKDQY
LTNVLLKINAKLGGLNSQLKSEINKGIPLVSTISTIIFGMDVSHGSPGRSDVPSVAAVVS
SLEWPNISKYRASVCTQAPRLETIDNLFKEVGDDDQGLIKASLLEFYKSSRGKKPEQIII
FRDGVGESQFDDVLNTELADIIEACKFLDDKWLPKFTVIVAQKNHHTRFFPHNDNGHNPN
VQPGTVVDDGICHPSNYDFYMCAHYGMIGTTRPTHYQVLHDEIGFSPDELQELVHSLSYV
YQRSTTAISVVAPIYYAHLAAAQVAKFTRLDDMSETSSSHATQAAPALVPELPRLHDKVA
SSVFFC
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctggccgtggcaatggtggtggacggtggaacggcggtggaggtaacttcg
gtcctggccatggaaataatttctttgaaggaagttctagtggtactgctggtcagggtg
atgggaatagggactcagagtatcgtgacggaggttttgatggtgtctttcgtgctggtt
atgggaattcagagggagatagaggaagatccaattatgggaattatgggcaggggtata
atcgtgctggagatcgtcgcccgtataccggccaagggaactttgcataacggcggacca
acaatggaactggtgcccgtgatactaggcttgatagcaatgcctggccagcaagcttcg
agtcagatgttcaaggttgatgatgcagccacggaccaacaatcagctgaggttcagatg
gcgaagaagaaaaaaggttttggatgctttagatgtgggcaggtcggacattgtttgaat
gattgcaaagcaacaatttgtgagtgctgtcaaagtactgaacacatatctaggaactgt
cctttacttagcgcccctaagcccaatatggtgatgtatggtctggctcatgaagaactc
atgttttgggatattcatatgtcaacaaatgtcagaccaaggctagagaacacacgtatg
gaaagagttacaatttctggtggtgaacttactataccagaaataattgttcagttacaa
tggatagtaccagatgaagcttatcagtgggatgtagtaagggtggaggataatgtgtat
tgtgtcaactttcctagcaagatggatttggtgagagtgcagcactttggtcgttttaat
atacctaattctgaaatttacatgacttttgatttctggaaaagatctgttgaacctata
tggagggcgcatgaggtttgggtaagagtgtatgacttacccactctagttctggatgat
tacttagccatgtgggctataggcaatttgtttggcaagacaacagatattgatatcact
tttacaagggctaatgatgtgctgcgtatgtatattatttgtcttgacccttctctcatc
cctgctcggatggacataagggtgctagatgatttttacagaatgaggtttgaagtagag
ggtgctcaacctgtaagagctgccgatgtggtgatgaatgaagcaaacaatggggaaggt
gatatggagcatgatggtccaaatggcaatattgagcagccgggttctgttgatgagaac
aattctgttgatcaacaagatggacataattgtactacaaatctaccgactgatgcacag
ggacagagacttgctctttcccctttccagtttggtgtggcgggttctgaaattgttgtc
aatggggggatttttgttgctgttccgaagtctccaactgtaattttcagtgctgaaatt
gagaaacggctaaaaggctttgagtgtgtcaagagcttggcgtccgaattttctgctgaa
gtgaccaaccgggtgcaacttcagaacctgtcatcacatgtgcccgctgattctttctac
gttgctgatacctctatcgggccgactgagcacagcccggcccagtcagatacgcaggag
aaccagcctgcggtccagcccagcatgcatgtggccatgcagggttcgtcgatcggcggc
acagacgctgcggcaagctacatcgcaccttgtattgttccgactcctgtaggggtctcc
gagattgttgctgagtctccaaggagacaacctagcctggatgagatggagtctcaaagt
ggcaagggagatcccagcaagccaccggcgtctgacggtggcaagggcgatcccagcaag
tcaccagtgtctgacggtggcaagggtggttccagtatgacggccaagcctcagaggctt
cccatcaaaaggccaacccagcatgcaacaaaagggaggcccgtaatgctactcacgaac
catttcaaagtctctctcaccagaacagatcagatactctaccactatgatgtgactctg
aagtacgatgatggcgaactcggagaaggcgtgcgcagaaaggtgatgaagcagctgtac
gagacctatgcctcacatctcgcgcacgaagtattcgcctatgatggcgagaagggtctc
tttaccgttgggcctctcccatttaagaacaatgtgtttgacgtagttctatgcgacgac
gcttcatcgggaaagactggaacgagccgtagccccggaggagatggcagtccaggacca
agtgacaagaagagaatgaaacgagcagtgtatcccaaaagattcaaggtggagatagcc
tccacctctgcggcaaggattccgatgagtgccattgcccaggttctgcgtggtggtcag
gaatctgagaactcgcaggaagctatacgggttcttgacatcatactgaggcagcattct
gcaagacagggttgtctcttagtccgagagtcttttttccatagcgaatttggctccata
gacgtgggtagtggcgtgatcggttgtcggggtttccattctagctttcgacccactcaa
aatgggctttcgctcaactttgatttatccacaacgatagtagtgagacatggtcctgtg
attgattttctgctcttcaaccagaatattaaggactgtaaaagaattgattggggcaaa
gccaagcgtgcactgaacaatctatggatcaaaaccactcacaggaaagcggaatttaag
attgttggattatctgaaaaaagatgctatgaacagaagttctcacgaaagcaaggagag
ggcaacggtactgtggaggtaactgtttatgattactacatggaccgttggtctatcaag
ccggataactctgctgatcttccatgtcttattgtgggggagccagatcgtccaacatac
ctcccgctggagctttgccatctgctgccactacaaaggtacaaaaagtctctctccacg
ctgcaaaggtcaaaactggttgagggatccaggcagaagccgcgtgacaggatgtcgact
ttgtctcgtgcgttgcgtgacaataattatgataccgagccaatgctgagggaatgcggc
atttcgatatctcgagatcctatgaaggttgagggtagagtccttcaggcaccacagtta
agcgttgcacatggtagagaactttatacaccgaatgggaggtggaatttcaataatgac
aggttcattcggccaattaaagtgacgacctggggagttgttaatttttctgcacggtgc
aatgttagtgatctaatcaggcgccttatggaatctgctcacaagaagggaattcaaata
gacaattgtggtgctattattgaggaggggggtgatatgagacgggagcgtccagcaaaa
agggttgaggctatgtttaagcagatacaagacatatccaatcaaaaaccagcatttctc
ctgtgtcttcttcctgagaagaactgtgacatctatggaccatggaagcgtgaatgcctt
gctgaacatggtatcttcacccaatgcttggttcctcctgctaatatcaaagatcagtac
ctcacaaatgtactgttaaagataaatgccaagcttggcgggttgaattcacagcttaaa
agtgaaataaacaaaggcattcctctggtgtcaacgatttcaaccattatcttcggtatg
gatgtttctcatggttcacctggacgatctgacgtaccgtcggttgctgcagtggttagt
tccttggagtggccaaacatctcaaaatacagagcttctgtatgcactcaggcacccaga
ctggaaacgattgataacttgtttaaagaagttggagacgacgatcagggcctcattaaa
gcttcactactcgaattctacaagtccagtagagggaagaaaccagaacaaattatcatt
ttcagggatggagtaggtgagagccagtttgatgacgtgctgaacactgagctagctgat
atcattgaggcatgcaaatttcttgatgacaaatggttacccaagttcacggtgatagtt
gcacagaagaatcaccacacaagatttttcccgcacaatgacaatgggcataatcctaat
gtccagcctggcactgttgtagatgacggaatctgccatcccagtaactatgatttctac
atgtgtgctcattatgggatgattgggactacaaggccaacacactaccaggtgctccat
gatgagataggcttctctcctgatgagctgcaggagctcgtgcattccctctcctacgtg
tatcagaggagcaccacagcaatctcagtagttgctcccatctactacgcacaccttgca
gcggcgcaggtggcaaagttcaccaggctggatgacatgtcagagacatcgtcgagccat
gctacccaggctgcacctgccctggtgccagagctacctcgtctgcatgacaaagtagcg
tcatcggtgttcttctgctaa
DBGET
integrated database retrieval system