KEGG   Lolium rigidum (rigid ryegrass): 124663796
Entry
124663796         CDS       T09103                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124663796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124663796
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124663796
Spliceosome [BR:lrd03041]
 Complex B
  Other components
   Prp19 complex
    124663796
 Complex C
   Prp19-CDC5 complex
    124663796
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    124663796
SSDB
Motif
Pfam: BCAS2 THOC7 Arc_MA DUF4140 HAUS6_N Gp-FAR-1 DUF5930
Other DBs
NCBI-GeneID: 124663796
NCBI-ProteinID: XP_047057412
LinkDB
Position
6:223642581..223647460
AA seq 303 aa
MGQSIQVHISELCSPKRKRPALSIFFLHCSAPRDTLTYPLSPTSARPAAVMASREVLMLE
APPAEAAGVPWRAPPDAETVDALPYIDGDYGDPAVKREVDRLVDEEMRRAHRKPADFLRD
LPPVPSAGFQDHPMLAKEYERVRAGKPPATIEMSRYGLEPPPANKRNDVAAWRQALRNAQ
SQLQHQIIRIENLELMLKHGVEVWKLQNRKMESVLSRMQKMALEYNEKIETVNRERKFHQ
QNTGGQLHALTVEWQELCQKNIAIQAACVDLQNQIDQLKLEAKEQGMLVDDSNGTNLQTS
EGI
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggccagtcgatccaggtacacattagtgaactatgcagccctaaacgcaagcggccc
gccctgagcatcttcttcctccactgctccgcgccgcgcgacaccctaacctaccctctc
tcgcctacttctgcgcgaccggccgccgtgatggcgtcgagggaggtgctcatgctggag
gcgccaccggccgaggcggcgggggtgccgtggcgcgcgccgccggacgcggagacggtt
gacgcgctgccctacatcgacggcgactacggcgacccggcggtgaagcgggaggtagac
cgcctcgttgacgaggagatgcgccgagcgcaccggaagccagccgacttcctccgcgac
ctcccccctgtaccctccgccggattccaggatcatcctatgcttgcgaaagagtatgaa
cgtgttagagcaggcaagccacctgctaccatagagatgtcccgctatggtttggagcca
cccccagcgaacaagaggaatgatgttgctgcttggaggcaggctctacggaatgctcag
agccaactgcagcatcaaattataaggattgagaatctggagcttatgctgaagcacggt
gttgaggtttggaagctccagaacaggaaaatggaatcggttttgtctaggatgcaaaag
atggctttggaatacaacgaaaaaatagaaaccgtcaaccgtgagaggaaatttcatcag
caaaacactggtgggcaactccatgcattgacagtagaatggcaggaactgtgccagaaa
aatatagctattcaagctgcctgtgttgatctgcagaatcagattgatcagcttaaactt
gaagctaaagaacagggaatgctagtggatgacagcaatggaactaatctgcaaacatca
gaagggatttga

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