Lolium rigidum (rigid ryegrass): 124664034
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Entry
124664034 CDS
T09103
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124664034
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124664034
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124664034
NCBI-ProteinID:
XP_047057599
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Position
6:complement(261455198..261476185)
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AA seq
545 aa
AA seq
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MSRNRHPSTRQPPPRAAAAGLPGTELTATAAQPPHPQGVHQIAMMDSDDEMMAQIQADQI
RRSARASARVFIRIDPPRSRTCHKLGRRKIQHRYKQDQIPQSCVRTRSVPSPLRAMRNNT
RRAGLAKSLKTSRMLRFIFEAVYNSEPNHRIPAQRTFFLVVLLLVLAAVQSAAQQGKRYS
VMDFHAAGDGSTDDAKAFAATWNATCGDSSSPTMVIPGGKTFLLSQIRLDGPCKSPVTVE
LDGKIVAPNSIWTTAAANLLTFYSVNNLTVNGSGQMDGNGDIWWTCFNQKKCHVRPILLA
FASCNNLSVKNIHLKDSPDKHMTLFRCSQVQVNNMSVRAPGDSPNTDGINMAFSDHVYIS
NCSFQTGDDCVSILSGTSDVTVSNSTCGPGHGISVGSLGGDGSTSLVERITVSNCSFSKT
LTGVRIKSWQGGNGKANGFLFENLNMTDVQFPIDIDQFYCPRGNCPAQDSAVAISDARFI
NIQGTSSNPEAIRILCSQSVQCRGIYLDNVNLTSSSQTAQTRATISNAYGTVGGMVKPHV
QFLGA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaaccgccatccatcgacacgacagccacctcctcgagcggcggccgctggt
ttgcccggaacagagctcaccgccaccgccgcacaaccgccccacccgcaaggtgttcat
cagattgccatgatggacagcgacgacgagatgatggctcaaattcaggctgaccagatc
cgccgctctgctagagcaagtgcacgtgtttttataaggatagatcctccacgatcaagg
acatgccacaagctgggcaggcgtaagatccagcatcgctacaaacaggaccagatacca
cagagttgtgttcgcacacgaagtgtaccctcgccactgagggcgatgcgtaacaacacg
cgccgagcggggctcgccaaaagtttgaaaacttcacgtatgctccgatttatatttgag
gcagtttacaattcagaaccaaatcataggatcccagcgcagcgtaccttcttcttggtg
gtgctgctgctcgtgttggcggccgttcaatctgcagcgcagcaaggaaaaagatacagc
gtcatggacttccatgctgctggggatggcagcacagatgatgcaaaggcgttcgcggcg
acatggaacgcaacttgcggtgacagcagctcgccgaccatggtcatccctggaggaaag
acgttcttgctaagccagatcaggttggatggaccctgcaagtcacctgtcaccgtggag
ctggacgggaagatcgtggcgccaaactccatctggacgacggcagcagcgaaccttctt
accttctacagcgtaaacaacctcacggtgaacgggagcggccagatggacggtaacggc
gacatctggtggacttgcttcaaccaaaagaaatgccatgtccggccaattttgctggca
ttcgcaagctgcaacaacctatccgtgaagaacatacacctgaaggacagccccgacaag
cacatgaccttgttccggtgcagccaggtgcaggtgaacaacatgtccgtcagggcgcca
ggcgacagccctaacacggacgggatcaacatggccttctccgaccacgtttatatctcg
aattgctctttccaaaccggagatgattgcgtgtcgatcctatctggcaccagcgatgtt
actgtctctaacagcacgtgtgggcctggtcatggcatcagcgtgggaagccttggaggt
gatggttcgacatcacttgtggaaaggattacagtatccaactgcagcttctccaaaacg
ttgactggcgtgaggatcaaatcgtggcagggaggcaatggcaaagcaaatgggttcctt
ttcgagaacctcaacatgactgatgtccaatttcctattgacattgaccagttttattgt
ccccggggaaattgtccggcacaggatagcgctgtggccatatccgacgccaggttcatc
aacatccaggggacatcctccaaccccgaagccatccggattctgtgcagccagagcgtg
cagtgccgcggcatctatctcgacaacgttaatctgacctcctctagccaaaccgcccaa
acacgagccactatttcaaatgcctacggaaccgttgggggcatggtgaaaccacatgta
cagttcctgggcgcttga
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