Lolium rigidum (rigid ryegrass): 124664073
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Entry
124664073 CDS
T09103
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124664073
09122 Translation
03015 mRNA surveillance pathway
124664073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124664073
Spliceosome [BR:
lrd03041
]
Complex A
Other components
Complex A specific factors
124664073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
zf-ChsH2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
124664073
NCBI-ProteinID:
XP_047057630
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All DBs
Position
6:complement(264897813..264902267)
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AA seq
413 aa
AA seq
DB search
MSGYGSDDYRGGGGGGYGGRGLRWILGIRLRPFLVVRCGNVNFARRTECNKCGSANPSGG
GGGGGGGGYDRSGGGYNRGGGDHGSGGGGGYSRGDGGRGGYNRDGGSGRGFDDHRGGSGG
YGGRDQENNQRVEKNTYNDGGYGQAPPKGPPSYGGPAGDYAAPPSSYGGSNVYSSDNAVP
PPNSYGGGRGSYPPSYGAPPQNPYSGGAPGGQGGLPPTYDGGYGGRSAPGSGGAGGAPPS
YHGGGGGGGYTGNATPEPATKVKQCDANCDDSCDNPRIYISNLPPDVTVEELQELFGGIG
QVGRIKQKRGYKDQWPWNIKIYADDSGKNKGDACLAYEDPSAAHAAGGFYNNYDMRGHKI
SVVMAEKSAPRAPTSGHGGGRGGGGGYGGDRRRDGGGHGPNRNQGGGSRSRPY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtacggatccgacgactaccgcggcggcggcggcggtggctacggcggccga
ggtctccgctggatccttggaattcgtctgcgtccttttctcgtggttcgctgcggtaat
gtgaactttgcgaggagaactgagtgcaataaatgtggttcagctaacccaagtggaggt
ggaggtggaggtggtggcggtgggtatgataggtctggtggaggctacaaccgtggtggt
ggtgatcatggttcaggtggtggtggtggctacagcagaggtgacggaggacgaggagga
tataatcgtgatggtggtagtggtcgtggttttgatgaccaccgtggtggtagtggtggt
tatggaggaagagaccaagagaacaaccaaagggtggaaaaaaatacctataatgatggt
ggctatggacaagctccccctaaaggtcctccatcctatggcgggcctgcaggtgactac
gcagcgcccccaagttcttatggaggaagcaatgtatacagttcagataatgcagtgcca
ccccctaacagctatggtggtggtcgaggctcttacccaccaagctatggtgccccacct
caaaacccatatagtggtggtgccccaggggggcaaggaggcctgccacctacatatgat
ggtggttatggtggtcgttctgcgcctgggagtggaggcgcaggtggcgcacccccatcc
tatcatgggggtggtggcggcggtggttatacaggaaatgctacccctgaaccagctaca
aaggttaagcagtgtgatgcaaactgtgatgattcctgtgacaatccaaggatttacatc
tcaaaccttcctcctgatgtgactgttgaggaactgcaagagctttttggaggaattggc
caggttggaaggatcaagcagaagcgtggttacaaagaccagtggccctggaacattaaa
atctatgctgatgattctggaaaaaacaaaggagatgcttgtctcgcttatgaagatcca
tctgctgctcatgcagctggtggattctacaacaattatgacatgagaggccataaaatt
agtgttgtgatggcggagaaatcggcacccagggctcccacatctggtcacggaggtgga
cgcggtggtggtggtggctatggaggggaccggcgcagagacggaggaggtcatgggcct
aacaggaaccagggtggtggttcacgttccaggccatactga
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