Lolium rigidum (rigid ryegrass): 124664346
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Entry
124664346 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: probable disease resistance protein At1g61300
KO
K03094
S-phase kinase-associated protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03083
Polycomb repressive complex
lrd04120
Ubiquitin mediated proteolysis
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124664346
04120 Ubiquitin mediated proteolysis
124664346
09126 Chromosome
03083 Polycomb repressive complex
124664346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124664346
04121 Ubiquitin system [BR:
lrd04121
]
124664346
03036 Chromosome and associated proteins [BR:
lrd03036
]
124664346
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
124664346
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
124664346
Cul7 complex
124664346
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
124664346
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
124664346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
LRR_14
LRR_8
LRR_4
AAA_22
LRR_R13L1-DRL21
LRR_RPS2
WHD_DRP
LRR_1
nSTAND_NTPase5
LRR_13
ATPase_2
AAA_16
AAA_7
PIF1
DUF6079_4th
Motif
Other DBs
NCBI-GeneID:
124664346
NCBI-ProteinID:
XP_047057843
LinkDB
All DBs
Position
6:289929845..289934086
Genome browser
AA seq
1148 aa
AA seq
DB search
MQAVAPCGGWCGATINTIISPFYNHFAKHALYCFTAGSNVRDHKIETEALKEKQAGIQQK
IRDDEHTLEAVPTDQAKLWLESVNRAISEEQANHLLYEQRCRLCGCCYPNFLENYKISKR
ADEHQKQVKSIMSNVPGGNNITHAPDPRSVESMLVDSAPMPRSREVILEDALLFIVSDDP
KDGIVGIWGTDKDDNTNLLKHINNSFLEKSLFDFIIFVSSPNDCSVTNIQSEIIRRLGIK
KDGNEATRATRIHEQLACKNFLVIVDDIRQNLDLRAVGIPYPLGFVGEKKRKVVIMSLSG
YRFVGNLMGVNKNIELPILQEGEARELFRQSVSYPGDLYSDPNIGQHATDLVHAINGLPS
ELARYGKSMHRIMDARSWKVAIDDAASKFSRSRSIEDTLRLIEDDPIFGVIGIWGPGGVG
KTHLLKKIHISFRGRINVIWVTASSQCSVSKVQTHILDKLKLKGDGNVANQSGIIRDFLE
NKSFLLLLDDLWERIDLEAVGLPLPLGIEPLSKLKRKVVLTTRFTSVCGGMEVKKQIQVP
YLQEIEAWELFREKVGDQTLFSPSIEDRARILVTEMKGLPLALVTVGRAMYGKFRLDQWD
SAIQHMQKSCCIDTNEDPLKMEEEVFRKIKFSYDNLKSERLKNCFLTCALWPEDCEIYRQ
ELAQCWIGLGLVDVGDIQSPYTKAYSLMSDLTGACLLEGYGESNDRVKLHDVIRDMSLWI
SCGYGKNNGNWFVRAGVGPDENFGIPWSSAEYISLMYNHMKKLPSVGDPLKLRVLCLQMN
HLDETIIGGVLVNSAKLTYLDLSSNELKGIPESLCHLTELIHLNLSNNYDIEKVPHSFGN
LIKLKSLYLEGTSIKVVPKEVISRLVALEIIHVDVILVSDSIRSNVYRELGTLNHLKVVV
TSVGLLDAWTSLSDAADLPIRCLRLVKSIEKKEFHLYDILSLDFAQTSLYELYISDDQDV
TDITLIQRPKQQPYSFSVLSVLTIRILPALTTVRWMGTSPKSVFPWLTCLSVSGCTKLEH
LSWAMYLPCLEKLDVQFNDSMRKAFTRYHVDNVWSGQESSQTFPCLKHLCLSSCISLVTI
VDPDVTFPSLEVLKIELCPELNKLPFDMSSLPRSLKVLMMYPAESWEQLELGEGVKSFLQ
PKLQYYSV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgtcgctccttgtggcggttggtgcggagctactatcaacacgatcataagt
ccattctacaatcattttgcaaaacatgcattgtattgtttcacggctggctcaaacgtg
agggaccataagatagaaactgaggctttgaaagaaaaacaggcaggcatccaacagaag
attcgggatgatgagcatacgttggaagctgttccaacagaccaggcaaaattatggcta
gaatcagttaatagagctatatctgaagaacaggcaaaccacctgttgtacgaacagagg
tgccgattatgcgggtgctgctacccaaatttcttggaaaactataagatcagtaagcga
gcggatgagcatcagaaacaggtaaaatcaataatgagtaatgtaccaggcggtaataat
atcacacatgcgccagatccacgttcggtagagagtatgctcgtagattctgctcctatg
ccgagaagcagagaggttattcttgaggatgctctcctattcatcgtgagcgatgatccc
aaagacgggatagttggaatatggggtacagacaaagatgataacacaaatctcctcaag
catatcaataattcatttcttgaaaagagtcttttcgattttattatctttgtttcaagc
cccaacgattgctcggtaacaaatattcaatctgagatcataagaaggctcggtattaag
aaggatggtaatgaggcaacccgagccaccagaatacatgagcaactcgcatgcaaaaat
ttcctggtgattgtggatgacattcgtcagaatctggaccttcgagcggtcggcattcca
tatcctcttggattcgtgggagagaagaaaaggaaagtggtaatcatgtcactgtcagga
tacagattcgttggtaatctgatgggtgtgaacaaaaatattgaactgcctatattgcaa
gagggggaagcacgcgagctatttagacagtcagtaagttatccaggggatctttattct
gatcccaacatcgggcaacatgctactgatctagtacatgcaataaatggtctgccatca
gagctggcacgttatgggaagtcaatgcatcgaataatggatgcaaggtcctggaaagtt
gctatagatgatgcagcaagtaaattttctaggtcgcgttccatagaagacactctccgt
ctcattgaggatgatcccatatttggtgtaattggaatatggggtccaggtggagtggga
aaaacacatcttctgaaaaaaatccatatctcattcagaggaaggattaatgttatctgg
gtgacagcctccagccagtgttcagtgtcgaaggtccaaactcatattttagacaagctc
aaactgaaaggtgatggtaatgtggcgaaccaaagtggtataatccgtgacttcctggag
aataaaagctttttgttgctgttagatgacctttgggaaagaattgatctagaagcagtt
ggcttaccacttccccttggaattgaacctttgagcaaactcaagagaaaagttgtgctc
acaacacgatttacatccgtttgtggtggcatggaggtgaaaaaacagattcaagttcca
tatctgcaggagattgaggcatgggagctattcagagagaaggtcggagaccaaactcta
ttttctccttctattgaagatcgtgcaagaatacttgtgactgaaatgaagggcttgcct
ttagctttggtaactgtgggaagggcaatgtatgggaaatttcgtctggatcaatgggat
tcggccatccaacatatgcaaaagtcatgctgcattgacacaaatgaagaccccctgaag
atggaggaagaagttttcagaaaaatcaagtttagctatgataacctgaaaagcgagagg
ctgaagaactgtttcttgacttgtgcactgtggccagaggattgtgagatttacaggcaa
gagctcgctcaatgctggattggcttaggtctagtggatgtgggagacatacaaagtccc
tacacaaaagcttatagtctgatgagcgaccttacaggtgcatgtttgttagagggctat
ggagaatcgaatgatcgtgtcaaactacatgatgtgattcgtgatatgtctttatggatc
tcttgtggctacggtaagaacaatggcaactggtttgtccgtgcaggagttgggccagat
gaaaattttggcatcccttggagcagtgcagaatacatttcattaatgtacaaccacatg
aagaaacttccttctgttggtgatccgctgaaactgagggtgttatgccttcaaatgaat
catttggatgaaacaataataggtggagtacttgtgaattccgctaaactgacatatctg
gatttgagcagtaatgaactcaagggtatacctgaaagcttatgtcacctgacagaattg
atacatctcaatttgtcaaataattatgatatagagaaagtgcctcatagctttggaaac
ctcattaagctcaagagcctgtacctggagggcactagcataaaagtagtaccaaaggag
gtcatatctagacttgtagcattggaaataatacatgtggatgttatattggtgtctgat
tctatcagatctaatgtgtatagagagttgggcacactgaatcacttgaaagttgttgtt
acatcagtaggacttttggatgcatggacatcactttctgatgcggctgacctacccatt
cggtgtttacgtctggtaaaatctattgaaaagaaggaattccatctctatgatatttta
tcattggacttcgcacaaacatccttgtatgaactgtatatttcagacgaccaggatgtg
acagatataacattaatacagaggcctaaacagcaaccctacagttttagtgttctcagt
gtcctgaccatccgtattttgccagcattgacaacagtaagatggatgggaacatctcca
aaatctgtatttccatggctcacttgtttgagtgtgtcaggctgcaccaagctagagcac
ctgtcttgggcgatgtatctgccttgccttgaaaaactcgatgtacaattcaatgatagc
atgcggaaggcttttacaaggtatcatgttgacaacgtgtggagtggacaagagagttcc
cagacatttccttgtctcaagcacctttgtcttagttcctgcatatcgctggtcactatt
gtggatcctgatgtgacattcccatccctagaggtgctgaagattgaactttgtccagag
ctgaataagcttccttttgacatgtccagcttaccacgaagtctgaaggttctaatgatg
tatcctgctgaatcctgggagcaattggaactgggggaaggtgtcaaatctttccttcaa
ccgaagcttcaatattattctgtttaa
DBGET
integrated database retrieval system
