Lolium rigidum (rigid ryegrass): 124664595
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Entry
124664595 CDS
T09103
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124664595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124664595
04121 Ubiquitin system [BR:
lrd04121
]
124664595
03036 Chromosome and associated proteins [BR:
lrd03036
]
124664595
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124664595
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124664595
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124664595
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124664595
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124664595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
BRCT_2
PHD_NSD
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
124664595
NCBI-ProteinID:
XP_047058033
LinkDB
All DBs
Position
6:complement(311580216..311585404)
Genome browser
AA seq
565 aa
AA seq
DB search
MAKYIIGLVFLPPLKAVFSLKLLLPDASDYPISQSLGLGGMILSTKSAMRTSTMVNIKTE
TDDGNLEVLQQRQMQNEAMASQSICQTKQSLAGKNASPGVNASNTKIRRGLGKDGKFEVN
EGTTGLRPPTPINLFEDECVFCHSFRTSEEFHGPMVQYQNGRIVSTNEGNPTNTIYVHKK
CMYWAPRVYLNGDIIVNMEKEISRASRLKCSRCNLPGAALGCYNEPCGQTYHVPCARMMV
PKCRWDVKYLNVLCPKHESDPLPGDESSPIMESNISSPILRNQYLDKQVMHVIYRREDQQ
VDQLNTSSSSSLPRGQYSDIEGISADYRREEKQMKHSRTPVNQWVLLGSVLSASEKDSLK
EFASLTNSTLVEEWDKNVTHVIVGRGAGSKSLNESYEVLMATLSGKWVVTAGWIVDCLVE
AIPRPKTCLAEPIPGPEISYEVTSIDGPKKGRAEATEMAPKLFSGLHFLLSAYMKPEDTG
NIKDLIVAAEGQVLDEMSPCSLQENLDQNPAKVYFVYASTYCLDLGKEMEEAVKYQDSGA
QVISEWSLYGAIAAYDVRILERIST
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtacattatcgggctcgtattccttcctccgctcaaagctgtgttctccctc
aaactgctacttccggatgcatccgactacccgatctctcagtctctcggcctcggcggc
atgatcctgagtaccaagtcagctatgcgtaccagcacaatggtcaacataaaaacagaa
actgatgatggcaatcttgaggttctgcaacaaagacagatgcagaatgaggcaatggct
agtcaaagcatctgtcagaccaaacaaagtcttgctgggaaaaatgcgtcaccaggtgtt
aatgcaagtaacactaaaatacgcagaggtttggggaaagatggcaagttcgaagtcaat
gaaggtactactggattgagaccgccaacaccaatcaacttatttgaagatgaatgtgtt
ttctgccattcatttagaactagtgaggagtttcatggtccgatggtacaatatcagaat
ggaaggattgtgtctaccaatgagggcaacccaaccaataccatttatgtccataaaaaa
tgcatgtactgggccccaagagtatatctcaatggtgatattattgttaacatggagaag
gaaatcagtcgtgcttcaagattgaaatgcagcagatgcaacctcccaggagcagctctt
ggttgttataatgaaccgtgcggtcaaacttatcatgttccatgtgcaaggatgatggta
ccaaaatgccgttgggatgttaaatatctcaatgttctgtgccccaagcatgaatccgat
ccattaccaggtgatgagagctcaccaataatggaaagtaacatttcttcgcccatcctt
cggaatcaatatttagataaacaagtaatgcatgtcatttatagaagggaagatcaacaa
gtagatcagctgaacacttcgagttcttcttccttgcctcggggtcaatattcggacata
gaaggaatttctgccgattaccggagagaagaaaaacaaatgaagcactctagaacccct
gtgaatcaatgggtcctactcggttcagttttaagtgcatcggagaaggattccctcaag
gaatttgcttccttgaccaattcaaccttggttgaggaatgggacaaaaatgtgactcat
gttattgtgggtagaggtgctggtagtaaatctctaaatgaatcatatgaggtcctgatg
gcaacactctctgggaaatgggttgttacagctggatggattgtggattgcttagtggag
gcgattccacgtccaaaaacttgcttggcagagccaattccaggtccagaaatttcttac
gaggtgacatcgattgatggaccaaagaaaggaagagctgaagcaactgaaatggcacca
aagctgttctccggacttcatttcttactcagcgcctacatgaagccagaagacactgga
aacataaaagatctcatagtagccgccgaagggcaggtactagatgaaatgagcccatgt
tcattacaggagaatttggaccaaaatccagccaaggtatacttcgtctatgcttccact
tattgccttgatcttggcaaggagatggaggaggccgtcaagtaccaggactcaggagcg
caggtgatcagcgagtggagtctgtatggcgctatcgcggcttatgatgtgcggatcctg
gaacggatatctacttga
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