Lolium rigidum (rigid ryegrass): 124664799
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Entry
124664799 CDS
T09103
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124664799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124664799
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124664799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
124664799
NCBI-ProteinID:
XP_047058193
LinkDB
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Position
6:331721561..331730443
Genome browser
AA seq
1211 aa
AA seq
DB search
MQPRRQQQSILSFLHPRRTPAGDPLGPAAGSTPERPPRPPAAASVDGIMERLARPPSQAR
NKDAAQVRHVEDRALPGKNQRISDERPSALFSGPYSDEYSRETTLFADVSPLQEPLKCST
TSSMDKFVRASTLFPEPGSDETLFQECPKKLSSESPNNQYTTAASIFEEFDVQTPSQDPL
RRNFSGPFRGADTPLSEYGSDPTQHPSKKLPLVSSSGEQVRAATPLGLGSDDSPTMNHSK
KLFTGSSDSSYIKATNLFADFDSNGTPLQNQSKKFPVFLNAKHTGAPATLFPELDSVSLK
PETPLTRAVTPRAKRVQQDHSPLWGSNKKVKSAQCSPVEKMVQDEMAEGARSKFEWLNPP
NIRDANKRRPEDPLYDKRTLFIPPDALRKMSTSQKQYWTVKCKYMDVVLFFKVGKFYELY
EVDAEVGQKELDWKMTISGVGKCRQVGISESGIDDAVEKLLARGYKVGRIEQMESAVQAK
ARGPNSVIERKLVHVSTPSTAADSNIGADAVHLLALKEVTLASNGSRVYGFAFLDYAALK
IWVGSLEDDDSSAALGALLVQVSPREIIYESSGLSRESRKSMLKYASAGSVKMQLTPLSG
ADFSDASQIKMLVHSKGYFKASTDSWLSALDYSVNQEAVICALGGLIGHLTRLMLEDALK
NGEVLPYNVYQTCLRMDGQTLVNLEVFSNSFDGGSSGTLYKHLNHCITASGKRLLRRWIC
HPLKDVNAINRRLDIVEGFIQNCGVGSITLEHLRKVPDLERLLGRVRSTVGLTSAVMLPF
VGDKILKRRIKTFGMLIKGLRVGINLLSVLRREDHGISALSKSVDIPTLSSLDELVHQFE
EAIDNDFPRYQDHDIEDDDANTLAILVELFVGKASEWSLVINAISVVDVLRSFAAMALSS
SCTMCRPRVLVKDKVPILRMKGLWHPYAFAESATGPVPNDLSLGQDLSGQNRFAFLLTGP
NMGGKSTIMRATCLAILLAQLGCYVPCTSCELTPADSMFTRLGATDRIMSGESTFLVECT
ETASVLQNATEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEQVRCRLLFATHYHPLTKE
FGSHPHVSLQHMACMLRPKSGGSGEKELTFLYRLASGASPESYGLQVATMAGIPMSTVEK
ASVAGQMMKSKIARNFKSSEGRAEFSTLHEDWLRTILAIGGVKDGHLDEDTMDTMFCVAQ
ELKSHFRKGGR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcgccggcagcagcagtccatcctctccttcctccacccgcgccggaccccg
gcgggggaccccctcggtcccgccgccggctcgacccccgagaggcccccgcgccccccc
gccgcggcctccgtcgacggcatcatggagaggctcgcgcggccgccgtcgcaggcgaga
aacaaagacgccgcccaggttagacatgttgaggacagagccttgcctggtaaaaatcaa
cgtatctcagatgagcgcccaagtgcattattctccggaccatacagtgacgagtatagc
agagaaactacgctattcgcagatgtcagtcctctgcaggagccgctgaaatgctccacg
acttcttccatggataaatttgttagagcaagcacactgttcccagaacctggttcagat
gaaactctgtttcaggagtgtccgaagaagttatcctcagagtcccccaataatcagtac
actacagctgcttcgatatttgaagaatttgatgtacaaactccttcccaggaccccttg
aggaggaacttctctgggccgtttcgtggagcagatacacctttatcagagtatggttca
gatccaactcagcatccatcgaagaagttaccattggtttcctcaagtggtgaacaggtc
agagcagcgacaccacttggacttggttcagatgactctcctacaatgaatcactcaaag
aagctattcactggatcttcagactcttcatacattaaggcaacaaatctgtttgcggat
tttgattcgaatggaactccactgcagaaccagtcgaaaaagttcccagtttttctgaac
gctaaacatactggagcacctgctacactatttccggaacttgattctgtttctctgaaa
ccagaaacgccactgacgcgagcagtgactcctcgtgccaagcgagttcaacaggaccac
tctcctttgtggggttcaaacaagaaggtgaaatcagcccaatgttctccagtggagaag
atggttcaagatgaaatggctgaaggtgcacgtagtaaatttgaatggctgaatcctccg
aatatcagggatgcaaataaaaggcggccagaggatccactttatgacaagagaactctt
ttcattccacctgatgcactgagaaagatgtcaacatctcaaaagcaatactggactgtt
aagtgcaaatatatggatgttgtcctctttttcaaagtgggaaaattttatgagctctat
gaagtagatgccgaggttggtcaaaaggaacttgactggaaaatgactatcagtggtgtg
ggcaaatgccggcaggttggcatttcagagagtgggatagatgatgctgttgagaagctt
ttagctcggggatataaagttggaaggatagaacaaatggaatctgcagtacaggcaaaa
gctagaggaccaaattcagttattgaaaggaagttagttcatgtttccacaccatcaact
gcagctgacagcaatataggggctgatgctgttcaccttcttgcattgaaagaggttacc
ctagcttctaatggttctcgggtgtatggatttgcttttctagattatgccgctcttaaa
atatgggtgggttcactcgaggatgatgattcatctgcagctttgggggctttgctggtg
caggtgtctccgagggagataatctatgaatcctcaggcctctcaagagaaagccgtaaa
tctatgttaaaatatgcctcagcaggctctgtgaaaatgcagctgaccccattatctggg
gcagatttctctgacgcttcacaaattaaaatgctagtgcattctaaagggtactttaaa
gcatcaacagattcttggttatctgcattggattattcagtgaatcaagaagcagttatt
tgtgcacttggtggacttattggtcatttgactagacttatgctagaggatgctctaaaa
aatggggaagtgttaccttacaacgtgtaccaaacttgtctaaggatggatggtcagact
cttgtgaacctggaggttttcagcaatagttttgacgggggctcatcaggtactctgtac
aagcacctcaatcactgcataactgcatccggtaaacggcttctaagaagatggatatgc
catccactaaaggatgtcaatgctataaataggaggcttgatattgttgagggcttcatt
caaaattgtggggtaggctctattacacttgagcatctccggaaagttcctgaccttgag
aggttacttggacgagttagatccaccgtggggttaacatctgctgttatgttgcccttt
gttggagataagatattaaaaagacggattaaaacgttcggtatgcttatcaagggcctt
cgggttggaatcaacttattaagtgtcttacgaagagaggaccatggtatctcagcactg
tcaaagtcagtggatattccaaccctgagctctctcgatgaactagttcatcaatttgaa
gaggctatagacaatgactttccacggtaccaggatcatgatatcgaagacgatgatgct
aacaccttggctattttggtggaactatttgttggaaaagcttctgaatggtctctggtg
atcaatgccatcagtgttgttgatgtccttaggtccttcgcagcaatggcattgtcgtca
tcttgtaccatgtgcagaccacgtgttctggtgaaagacaaagtgccgatacttcggatg
aagggtctatggcatccctatgcttttgcagaaagtgcaactgggcctgtgccaaatgat
ttatctcttggccaggatttatctggtcagaatcgctttgcatttttgttgactggtcca
aatatgggaggcaagtctactataatgcgtgccacctgcttggctattttacttgcccag
cttggatgttatgtcccctgcacatcatgtgaattgacccctgctgactccatgtttacg
cggcttggtgcgacagatcggattatgtctggagaaagcacctttctcgtggaatgtact
gagactgcatctgttcttcagaatgcaaccgaggattctcttgtcttgcttgatgagctt
ggcagaggaactagcacatttgatggatatgcaattgcatatgctgtattccgccacctg
gtggaacaggtgcggtgccgtctgctcttcgccacgcactaccaccctctcacaaaggag
ttcggctcccacccccacgtgagcctccagcacatggcttgcatgctcaggccaaagagc
ggaggcagcggcgagaaggagctcaccttcctctaccggcttgcatcaggcgcctccccg
gagagctatggcctgcaggtcgctacaatggcagggatcccgatgtccacagtggagaag
gcgtcagtcgcaggccagatgatgaagtcgaagatcgctaggaacttcaagtcgagcgaa
gggcgagcggagttctccaccctccacgaggactggctgaggacgatcctggcgatcggt
ggtgtcaaggacgggcacctggacgaggacaccatggacacgatgttctgcgtcgcccag
gagctgaagtcccacttccggaaaggagggagatga
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