Lolium rigidum (rigid ryegrass): 124665048
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Entry
124665048 CDS
T09103
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
lrd04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124665048
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124665048
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124665048
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124665048
03036 Chromosome and associated proteins [BR:
lrd03036
]
124665048
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124665048
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124665048
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124665048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF3886
Motif
Other DBs
NCBI-GeneID:
124665048
NCBI-ProteinID:
XP_047058396
LinkDB
All DBs
Position
6:complement(326357834..326362013)
Genome browser
AA seq
487 aa
AA seq
DB search
MWKQFIGKLSWKSLKSSSGGGGGGGSPTAKSHPMSPRENGSVGKPNASPRSPSGVAAGEG
RSREDAFIQKVDICCTVYDFADRGKDSPEKERKRQVLMSLVDSIGAAEEPLTEAMMSACV
HMFRVNLFRVFPPKVRSATVGASETEEDEPFFDPSWYHLQVVYELLLRFVTSPFVDPKVA
RKYVDSSFVSKLLDLFDSDDPRERDCLKTVLHRIYGKFMGNRPFIRKAVSNIFYRFVSEA
DHHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKTVGVYLPQLTYCITQFI
EKEPKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELIDMAEFQKCMVPLFRRIANCL
NSSHFQVAERALFLWNNEHLFDMISQNRQVIVPLVYPALERNARLHWNQSVLNVTMNVRK
MFFDMDERLLLACQSNFQVEEEKRAATEERRRLTWEQLERNADAFQPANTSFPAAPSSAP
PVVPTVT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaatttattggcaagctgtcgtggaaatcgctgaaatctagctccgggggc
ggcggcggagggggctcgcctacggcgaagtcgcatcccatgtctcccagggaaaatggg
agcgtaggaaagccgaacgcctcgcctaggtcgccctcaggggtcgccgcaggcgagggg
agatccagggaagacgccttcattcagaaggtggatatttgctgcacggtgtacgacttc
gccgaccggggcaaggactcgccggagaaagagaggaagcggcaggtgctgatgtccctc
gtcgactccattggcgccgccgaggagcccctcacggaggcgatgatgtcggcatgcgtc
cacatgttccgtgttaacctcttcagggtcttcccgcccaaggtccgatcagccaccgtg
ggggcatcagagacagaggaggacgagccattctttgacccctcttggtaccatctgcaa
gttgtgtatgaattgcttcttcggtttgtgacctcgccgtttgttgatcccaaggtggct
aggaagtatgtggacagttcatttgtctcgaagctgcttgacctgtttgattccgatgat
ccgagagagagggactgcttgaagacagtcttgcacaggatatatggaaagttcatggga
aatcgaccgttcatccgtaaggctgtgagcaatatcttctataggttcgtctctgaggca
gatcatcacaatgggatagccgagctgttggaggtgtttggcagtgtaataagcgggttt
gcaaagccattgaaggaggagcataagttgttcctatggaaagcgttaattccgcttcac
aagcctaagacagtgggtgtatatctgccacagctgacgtactgcataactcaatttatt
gagaaggaaccaaagcttgcaggaactgtgataagaggtctgttgaagtactggccagtt
acaaatagtcagaaggagatgatgttcttgggggagttggaagaggtgcttgagttgatt
gatatggctgagttccagaagtgcatggtaccattgttccgtaggattgcaaattgcctc
aatagctcccattttcaggttgctgagagagccttattcttgtggaataatgaacatttg
ttcgatatgatctcccaaaaccgtcaagtgatcgtgccgctcgtatacccagctctggag
agaaatgcccgattgcactggaaccaatcagtgctcaatgttacgatgaatgtgagaaaa
atgttcttcgacatggacgagagattgctcctggcttgtcagagcaacttccaagtggaa
gaagagaagcgagccgcaacggaagagcgtcgaaggcttacatgggagcagctggagcgt
aatgctgatgcattccaaccagctaacacgagctttccagcagccccttcttcggcccct
ccagtagttcccacagttacatga
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