Lolium rigidum (rigid ryegrass): 124665196
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Entry
124665196 CDS
T09103
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
lrd04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124665196
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124665196
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124665196
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124665196
03036 Chromosome and associated proteins [BR:
lrd03036
]
124665196
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124665196
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124665196
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124665196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
DUF5899
ASA1
Motif
Other DBs
NCBI-GeneID:
124665196
NCBI-ProteinID:
XP_047058572
LinkDB
All DBs
Position
6:complement(173312132..173318487)
Genome browser
AA seq
490 aa
AA seq
DB search
MNGTATPEPTEASAPTPQPPLDWRFSQVFGERGAGEDVQDVDIISAIEFNKTGHHLATGD
RGGRVVLFERTDAKDHVSRKEAEKADYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIKWCQETNGASFLLSTNDKTIKFWKVQEKKVKKICEMNMNTSNAHVNGGPSTHVPNGG
ILKPGGLALLRMPVVVTSQETSLAANCRRVYAHAHDYHINSISNNSDGETFISADDLRIN
LWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPSHCNTLAYSSSKGSIRLVDLRQSAL
CDTHSKLFEQHESAGSRSFFTEIIASISDIKFSMDGRHILSRDYMTLKLWDVNMDSGPVA
TFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSYSNIFRVFNCGAGDNEVTTL
EATRNPTRRQAQNPARPVRSMTRNVRRENTGIDANGNSYDLSTKLLHLAWHPAENLIACA
AANSLYMYYG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacggcgacgcccgagcccacggaggcatcggccccgaccccgcagccgccg
ctcgactggaggttctcccaggtcttcggcgagcgcggagcaggcgaggacgtccaggac
gttgacatcatctcggcaatagagttcaataaaacaggacatcatcttgccactggggac
agagggggacgagttgttttgtttgaaagaacagatgccaaagatcatgtctccagaaaa
gaggctgagaaagctgattattctatcagcaggcatccagaatttcgttacaaaactgag
ttccaaagccatgaaccagagttcgattaccttaaaagcttggaaattgaagagaagatt
aacaagataaagtggtgccaagaaacaaatggtgcgtcgtttcttctgtccacaaatgac
aaaacgataaagttttggaaggtccaagagaagaaggttaaaaagatatgtgagatgaat
atgaacacttcaaatgctcatgtgaatggtggcccaagcacacatgttccaaatggtggc
attttaaagcctggtggacttgctttacttcgcatgcctgtggtagttacaagccaagaa
accagtctcgctgcaaattgtcgtagagtctatgctcatgcacacgactaccacatcaat
tccatttcaaataacagtgatggtgagacgttcatatcagcagatgatttacggataaat
ctttggaatttggaaatcagcaatcaaagtttcaatattgttgacgttaagccaacaaac
atggaggatctcactgaggttataacatctgcggagttccatccttctcactgtaatacg
ttggcatatagtagctcaaagggctccattcgacttgttgacctgcggcaatcagctctt
tgtgatactcattccaaactctttgagcagcatgagtcagcgggttcaagatcctttttt
actgagattatagcctcaatttcagacataaagttctccatggatgggagacatattctg
agtcgcgactacatgactctgaagctatgggatgttaatatggattctggtccagttgcg
acgttccaggttcacgagtatttaaggcccaagttatgtgatttatatgaaaatgattca
atttttgacaaatttgagtgttgtcaaagtggagatgggttacgagtagcaactggttct
tacagcaacatttttcgtgtgttcaattgtggtgctggtgacaatgaggtaacaacgctt
gaagcaactcgaaaccctacaaggaggcaggcccagaatcctgcacggcctgtgagatct
atgacaaggaatgttagacgagagaacactggaatagatgccaatgggaattcctacgac
ttgagcacaaaactgctccatttggcatggcacccggcagaaaatctaattgcctgtgct
gcagccaacagcttatacatgtactatgggtaa
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