Lolium rigidum (rigid ryegrass): 124665383
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Entry
124665383 CDS
T09103
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
lrd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124665383
03460 Fanconi anemia pathway
124665383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124665383
03036 Chromosome and associated proteins [BR:
lrd03036
]
124665383
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124665383
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124665383
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124665383
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
124665383
FA (Fanconi anemia) pathway
Downstream FA components
124665383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
ChapFlgA_N
Motif
Other DBs
NCBI-GeneID:
124665383
NCBI-ProteinID:
XP_047058751
LinkDB
All DBs
Position
6:264827262..264836690
Genome browser
AA seq
1333 aa
AA seq
DB search
MEQFPLFQTGSGRVVSVSVASLQKAKSVFKDNNTSGENAESFGRPDQPTMFQTDSRRPVV
ISGRSIERSRGAAKEGDTEKSGQWDTDCQFPMFQTGLGKPVAVSCSSVQKARAVLEGEKN
NKTGHGDNGLSATNFQNETPRSVLMSSSSIMSDRTVTPNGDSAMQEKNHEAGNHLPLFQT
GLGRSIAVSKSSVKRASAVLEPRNIAKELEDEAHLDGGYDTPVFKTVLGRSILARESSGN
KVPVILEAEEALKSVNNDNGEAFVEDTSFQAGIQMFVPQRRSSSHKASILLEQQNFGEKG
YGDRGSQLPMFQTGSGKSVLISESSVQKARAVLEEEGNINKDTHKLLNMDQKFTVFTSPL
KTSCARTVNISSVGVSRAASLLGLEENTLSTQFFGHVGDKLGTKITVERENPDQRLDLAS
CTTENQVHKEPHRPFELSNNTVFDSGEHSIRFSTVGGRSMAISSDALQRAKSLLGESDVV
STNKSTDYSLAAGCKDEITNSTVAPKGGGSDFSKISRASGKPEIAAFSHQGMSDRKHTRS
FGHAVPDTPATNENANRFHGGSHSISEISKIPKPSSRFLSEADNAEDSKDKTQRLHMPAG
VLVDITNFMGTHSGNIDHVANEKRRIGGRNSPSPFKRPRSSRFIAPIITSKKSSAGIPKL
PPSQTTSCRTKLSASYPFQHKRKTWKEYFGGPPCFSFLTEHPTDEVKRMDAKGAEKYKFH
DTDTSAEEFQKMLLACGASLTYATKEWVNNHHKWIVWKLASLERCYPTKAAGKFLTVANV
FDELKYRYDREVNNGHRSAIKKILEGNALPSLMMVLCISAVYSHPDVNNSKGEAGRRDEN
ENSIDNKSLLAAKVNVPAQIELTDGWYALEASLDVALSEQLQKRKLFIGQKLRIWGASLC
GWTGPVSFHEISGTVKLMLHVNGSYRARWDDPLGFCKHVGPPLAFKCIKASGGRVPRTLI
GVARIYPVLYKERLSDGRSVVRSERMERKALQLYHQRVSKIAEDIMSEQDENCGNSDDSE
EGAEICKMLERAAEPEVMMAGMTSEQRISFSSYQAKQKEARQNEVAKKVENALEVAGLSS
RDVTPFVKVRVTSLTKKISASKTINKEGLITIWNPTEKQKADLVEGQIYFVTGLVPSSYC
TGSLYLHARGSSTMWKPLASAQAADFEPFFTPRKAVELSLFGEVPLASEFDIAGVVLHVG
DVYLCSSQKRQWLFLTDGSKFTSAQHSAEQDDCLLAVSFSCRIAGDDSVFFSHALSGNTV
GFSNLVKRQKDQMSRIWVAEATESSTYTISHEISKKSHLKEAAICAEKWASSSHSKIQQL
KERVLCIIGDSGG
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtttccattgttccaaactggttcaggaagagttgtatcagtcagtgtggca
tctcttcagaaagcgaagtctgtttttaaggataataacactagcggtgaaaatgcggag
agttttggtaggcctgaccagcctacgatgttccaaactgattccagaagaccagtcgtg
atcagcggaaggtccattgagagatctagaggtgcggcaaaggagggagatacggaaaag
agtggacaatgggatactgactgccagttcccaatgttccaaactggattaggaaagcct
gttgccgtgagctgcagctcagttcagaaggcaagggcagtattggagggagaaaaaaat
aataaaaccggacatggagataatggtctcagtgccacaaattttcaaaatgaaacgcca
aggtctgttttgatgagtagcagttcgatcatgagtgatagaaccgtaacaccgaacgga
gatagtgcaatgcaagagaaaaaccatgaggctggcaaccacttgccgttgtttcaaact
gggctagggaggtcaattgctgtaagtaagagctcagttaagagggcaagtgcagttctg
gagccgaggaatattgcaaaggaattggaagatgaagctcatttagatggtggctatgat
actccagtgttcaaaactgtattaggaagatctatcttagcaagagagagctctggaaac
aaagtaccagttatcttagaggccgaagaagcactaaaaagtgtaaataatgacaatgga
gaagcctttgttgaagacacatcattccaagctggaatacagatgtttgtaccccaacgt
agaagttcaagccataaggctagtattctgttggagcaacaaaacttcggggagaaagga
tatggagaccgtggaagtcaactgccaatgtttcaaaccggatctggaaagtcggtcttg
attagtgaaagttcagtgcagaaggcaagggctgttctggaagaagaaggcaatataaac
aaagatactcataagctccttaacatggaccaaaagtttactgtctttacttcacctctc
aagacaagctgtgcaagaacagtaaatatatcttcagttggcgtgtctcgagctgcttct
ttgttgggcttggaagagaataccctttcaacacaattttttggacatgtgggggataaa
ctaggcacaaaaataactgttgagcgggaaaatccagaccagaggcttgatcttgcatct
tgtacaacagaaaatcaagtgcacaaggaaccacatcggccgtttgaactttctaataac
acagtctttgattctggtgagcattcaatcagattcagtaccgtgggaggcagatcaatg
gctatttctagtgatgcacttcaacgtgcgaaaagtcttctgggtgaatcagatgtggtt
tcaacaaataagtcaacagattactctttggcagctggttgtaaagatgagataacaaat
tcaaccgtcgcccccaaaggcggtggatctgatttttcaaaaataagtagggccagtgga
aaacctgaaatagcagcattttcccaccaaggaatgtctgacaggaagcacactagatcc
tttggacatgctgtacctgatacccctgcgactaatgaaaatgctaataggtttcatggc
gggagtcattcaatcagtgaaatttcaaagattccaaagccttcttcgaggtttttatct
gaagctgacaatgcggaggactctaaagataagacacaacgactccatatgccagctgga
gtgttggtggacattactaatttcatgggtacacattctggaaatattgaccatgttgct
aatgagaagagaagaattgggggaagaaactctccgtctccatttaaacggccccgctca
tccaggttcatcgcacctataatcaccagcaaaaaatcctctgctggaatacccaagctg
ccaccatctcagaccacgtcctgtcgaacaaagctgtctgcatcttatccttttcaacat
aaaaggaaaacttggaaggagtattttggcggtcctccctgcttcagttttttgacggaa
catccaacagatgaagtgaagcgcatggatgcgaaaggagctgagaagtacaagtttcat
gatacggatactagtgcagaagaatttcagaagatgctgcttgcctgtggtgcttcattg
acatacgcaacgaaagaatgggtgaacaatcaccataaatggatcgtgtggaaacttgct
tcacttgagagatgctacccaactaaagctgctggcaaattcttgacagttgctaatgtt
tttgatgagctgaaatataggtatgaccgagaagtgaacaatggccaccgatcagcaatt
aagaaaattttagaaggaaatgctttgccatctttgatgatggtgctctgcatttcagct
gtttactcccatcctgatgtaaataactccaagggtgaggctggcaggagagatgaaaat
gagaacagcatcgacaataaaagcttgttagctgctaaagtaaatgtgcctgcacaaatt
gaattaactgatggatggtatgcactagaagcgtcattggatgtggcactttcagaacaa
ctacagaaaagaaagctttttataggacaaaagcttcggatatggggggcttctttgtgt
ggttggactgggcctgtgtcatttcatgagatatcaggcactgtcaaattgatgctccat
gtaaatggcagttatcgtgcaagatgggatgatcctttgggattttgcaagcatgttgga
cccccactggcattcaagtgcattaaagcttctggtggccgagtccctaggacactgatt
ggagttgcaaggatatatcctgttctgtataaggagaggttgtctgatggtcgttctgtt
gtgagatctgaaaggatggaaaggaaagcgctacaactgtaccaccagagagtatctaag
atcgcagaagacattatgtctgaacaagatgaaaactgtggcaattccgatgatagtgag
gaaggggcagaaatttgcaaaatgctagagcgggcagctgagcctgaagttatgatggca
ggcatgacgtcagagcagaggatatctttctcatcatatcaagcaaagcaaaaggaagct
aggcaaaacgaagtggctaagaaagttgagaacgctctggaagttgctggccttagttca
agagatgttacgccgtttgtgaaagtgagggtgacaagccttactaaaaaaatctctgct
tcaaaaaccatcaacaaggaagggctaataacaatttggaaccctactgagaagcaaaaa
gccgacctggtggagggacaaatttactttgtcacaggactggtgccttcgtcctactgt
actggtagtctttacttgcatgctagaggatcatctaccatgtggaagccattagcgtcg
gcacaggctgcggattttgaaccatttttcaccccacgtaaggcggttgagctatcattg
tttggtgaggtaccgcttgcaagtgaatttgacattgcaggcgtcgttttgcatgttggc
gatgtttatttatgtagcagccagaaaagacagtggctctttttgacagatggatctaaa
tttacctcagcacagcactccgcagagcaagatgattgtcttctagcagttagcttttct
tgccgaattgctggcgatgactctgtttttttcagtcacgccctttctggaaatacagtt
ggtttcagtaatttggtcaagcgacagaaagaccagatgagtcgcatatgggtagccgag
gcaacagagagctctacctatactatttctcacgagatctcaaaaaaatcgcatcttaag
gaagctgccatttgtgccgaaaaatgggcttcaagttctcattctaaaattcagcagcta
aaggaaagggttttatgcatcattggagatagtggtggctga
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