KEGG   Lolium rigidum (rigid ryegrass): 124665452
Entry
124665452         CDS       T09103                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124665452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124665452
   03041 Spliceosome [BR:lrd03041]
    124665452
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124665452
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124665452
Spliceosome [BR:lrd03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    124665452
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_11
Other DBs
NCBI-GeneID: 124665452
NCBI-ProteinID: XP_047058824
LinkDB
Position
6:168847236..168850700
AA seq 441 aa
MDPFSKKRKPDENGAATASPAAGAAALGLTRDDVLRLLEPLSRDQLADIAAAAALASGVA
LDAVRAAADRDPALRKLFVRGLGWETNSDSLRAIFSAFGDLEEAVVISDKTTGRSKGYGF
VTFRHADSAVLALKEPSKKIDGRVTVTQLAAAGAAGGPSGGAGGAGGAPSADVSLRKIFV
GNVPADMPSERLLAHFAAYGEIEEGPLGFDKTTGKFRGFALFVYKTPEGAQASLVDSVKV
IEGHQLLCKLAIEGKKGKQQPQQSGPAGQQQQQQMLPQDMPGPGHGLGGPQMGGQYGGPG
SGMPPSFGGFGGPGLGGGHNPYGNLPSSMGGGGGGAGMGSMGNQMPSGMGSAGAFGPGGM
GGGSFGGGSQFGAAGMGPYGGLGMGGASSLYRMQQGSGGLPSGYGEGGNYPLPGSGFRGQ
EMSPGPGGRAPPMYPNVPPYF
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggatcccttctccaagaagcgcaagccagacgagaacggcgcggccaccgcttccccg
gccgccggggccgccgcgctcgggctcacccgcgacgacgtcctgcgcctcctcgagccg
ctctcccgcgaccagctcgccgacatcgccgccgccgccgcgctcgcctcgggtgtcgcg
ctcgacgccgtgcgcgccgccgccgaccgcgacccggcgctccgcaagctcttcgtgcgg
ggcctcggctgggagaccaactcggactcgctccgcgccatcttctccgccttcggcgac
ctcgaggaggccgtcgtcatcagcgacaagaccaccggccgctccaagggctacggcttc
gtcaccttccgccacgccgactccgccgtcctcgccctcaaggagccgtccaagaagatc
gacggccgcgtcaccgtcacccagctcgccgccgcgggcgccgccggcgggccgtccggc
ggggcgggcggcgcgggtggcgccccttcggcggacgtgtccctccgcaagatcttcgtc
gggaacgtccccgctgacatgccgtccgagcgcctcctcgcgcactttgctgcctatggc
gagattgaggagggcccgcttgggttcgacaagaccacgggcaagttcaggggctttgcc
ctctttgtgtacaagacacccgagggcgctcaggcctcgttggtggactcggtcaaggtg
attgaagggcaccagctcttgtgcaagctcgccattgagggcaagaaggggaagcagcaa
ccgcagcaatctgggcctgctgggcaacaacagcaacagcagatgctccctcaggacatg
ccgggtcctggccatgggcttggtggaccacagatgggtgggcagtatggtggccctggg
agtggcatgccgccatcattcggtggatttggtggccctggcctaggtggtggtcacaat
ccatatgggaacttgccgtcctccatgggcggtggcggcggaggtgctgggatggggtcg
atgggaaaccagatgccttctgggatgggctctgctggtgcatttggccccgggggaatg
ggcggtggttcatttggaggaggatctcagttcggtgctgctgggatgggtccttatggt
ggtttaggcatgggcggggcatcctcactctaccggatgcaacagggctcaggtggactg
ccatctggatatggcgagggtggaaactaccctctgccagggtctggcttccggggtcag
gagatgtcaccaggaccaggtggcagggctcctccaatgtaccccaacgtgccaccttat
ttctaa

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