Lolium rigidum (rigid ryegrass): 124665579
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Entry
124665579 CDS
T09103
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124665579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124665579
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124665579
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Motif
Pfam:
DUF7885
LRR_At5g56370
LRR_4
F-box-like
Motif
Other DBs
NCBI-GeneID:
124665579
NCBI-ProteinID:
XP_047058933
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Position
6:complement(54867242..54877808)
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AA seq
380 aa
AA seq
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MVSAQLTSGNLDNSFNALMVSGGGESVQAQNGGTGTTFLGWKDLPMELLLRILSVAGDDR
MVIAASGVCTGWRDALGWGVTGLSFSWCQDHMNELLMSLAHKFTKLQVLSLRQIKPQVED
SAVEAVANNCHDLRELDLSRSFRLSDRSLYALAHGCLHLTRLNISGCSNFSDAALIYLTS
QCRNLKCLNLCGCVRAASDRALQAIARNCGQLQSFNLGWCDTVTDWGVTRLASGCPELRA
VDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLAANSRIRSKGMSWGTAE
SGGRRSRDDRDGLSNLNISQCTALTPPAVQAVCDSFPALHTCPERHSLIISGCLSLTAVH
CACALHPHRAGRALLSNHAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgcacagctgacgagtgggaacctggacaattcgttcaatgcactcatggtt
tccggtggcggtgagagtgtacaggcacagaatggtggcacaggcaccaccttcttaggt
tggaaggaccttccaatggagctgcttctgaggatcctatcagtagctggagatgacagg
atggttattgcggcctcaggtgtttgcaccgggtggcgtgatgcactaggatggggagtc
acaggtctttcattctcgtggtgccaggaccacatgaatgagttgttaatgtcattggct
cacaaatttacaaagcttcaagtcctttctctacggcaaatcaagcctcaggttgaagac
agtgcagtggaggctgtagcaaataattgtcacgatttgcgcgagttggatctgagcaga
agctttaggcttagtgatcgatccttgtatgctctggcacatggttgccttcatcttacg
aggctaaatatcagcgggtgttccaatttcagtgatgctgctttgatctacctcactagt
cagtgcaggaacctcaaatgcttgaatctgtgtgggtgtgttagggcagcttctgacaga
gcattgcaggcaatcgcacgtaactgtggtcagctgcaatcttttaacctaggttggtgc
gatactgtcactgactggggagtgactagattagcttctggatgccctgaacttagggct
gtggacctgtgtggttgtgttcttataacagatgagagtgtggttgctcttgcaaacgga
tgccctcacctgcgttccctggggctgtactactgccagaacatcaccgatcgtgccatg
tactcgctggcagcaaatagccgcatcaggagcaagggcatgagctggggcactgccgag
agcggtggcaggcgtagccgtgacgacagggacgggctctcgaacctgaacatcagccag
tgcaccgcactgacgcccccggctgtgcaggcggtgtgcgactccttcccagcgctgcac
acatgcccggagaggcactccctcatcatcagcggctgcctgagcctcaccgctgttcac
tgcgcctgcgccctccacccgcaccgtgcagggagagccctgctgtctaaccatgcttac
taa
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