Lolium rigidum (rigid ryegrass): 124665808
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Entry
124665808 CDS
T09103
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124665808
04121 Ubiquitin system [BR:
lrd04121
]
124665808
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
Other 90S particles
124665808
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124665808
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
eIF2A
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
PROPPIN
VID27
Motif
Other DBs
NCBI-GeneID:
124665808
NCBI-ProteinID:
XP_047059138
LinkDB
All DBs
Position
6:240237021..240245073
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AA seq
452 aa
AA seq
DB search
MRVKVISRSTEDFTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFAKPFVG
AMDGHIDAVSCMAKNPNYLKAMFSGSMDGDIRLWDIAARKTICQFPGHKGAVRGLATSTD
GDLLISCGVDSTVRLWKDPMRKMMDTNDAIGDASQPSAVYTWKHAFWGVDHQWDGTIFAT
VGAQVDIWDHNRSEPINSFTWGNDTANSVRFNPGEPDVLITSANDRSLTLYDLRMSSPAR
KLIMKTRCNSVCWNPREPMNFTAANEDTNCYSFDARKLNEAKIVHKGHVSAVMDIDYSPT
GREFVTGSYDRTVRIFNYNGDQSREIYHTKRMQRVFCVKYTYDGTYLVSGSDDTNLRLWK
SKASEQLGVILPRERKKQEYLDAVKERYKHLPEIKRIVRHRHLPKPIYKAGNIRRTMIEA
EKRKEDRRRAHSAPGSRTSQPFRKRRLIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggtgatatcgcgctcgacggaggatttcacgcgcgagcgtagccaggac
ctgcagaaagtattccgcaattatgatccagcgcttcgtagccaagagaaagcggtcgag
tacactcgggccctcaatgctgcaaagctagagaagatatttgccaagccctttgttggg
gcaatggatggtcacattgatgctgtttcgtgcatggcgaagaaccccaattatttgaaa
gctatgttctctggctcaatggatggggatattcgactatgggacattgctgcaaggaag
acaatctgccagttccctggtcacaagggtgctgtgagaggtttggcaacctctactgat
ggtgatcttctgatatcctgtggtgttgacagcactgttcgactctggaaagatcctatg
cgtaagatgatggacactaatgatgcaattggagatgcttctcagccgtcagcagtctat
acctggaagcatgcattttggggtgttgaccaccagtgggatggaactatttttgcaacc
gtaggtgctcaggtagatatatgggatcataacaggtcagagccaataaatagcttcaca
tggggtaacgatacagcaaattctgtgcggtttaatcctggagaaccggatgttttaatc
acatcagccaatgatcggagtttaactctttatgacctacgcatgtcatccccggctaga
aagctaatcatgaagacaaggtgcaattcagtatgctggaaccctagggagcccatgaac
tttactgctgcaaatgaagatacaaactgttactcgtttgatgctagaaagctgaatgaa
gcaaagattgttcacaagggccatgtttcagcagtgatggatattgattattcaccaaca
ggacgggaatttgttactggttcctacgatagaacggtacgcatcttcaattataacggt
gatcagagcagagagatataccatactaagaggatgcaaagggtgttttgtgtgaaatac
acatatgatggaacttatctagtttctggcagtgatgatacaaatcttcgactgtggaag
tccaaagcttcagaacaattgggagttattcttccaagggaacgtaaaaagcaagaatat
ctagatgctgtcaaggagcggtataagcaccttccggaaatcaagcggattgtcaggcat
aggcacttgcctaagccaatctacaaggcaggcaacataaggcgcaccatgattgaagca
gaaaaacgcaaagaagatagaaggcgggcacacagtgccccaggcagcaggacttcgcag
cccttcaggaagagaagactcatcaaagaagtcgagtaa
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