Lolium rigidum (rigid ryegrass): 124665869
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Entry
124665869 CDS
T09103
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124665869
03036 Chromosome and associated proteins [BR:
lrd03036
]
124665869
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124665869
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124665869
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124665869
microRNA pathway
RISC loading complex
124665869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124665869
NCBI-ProteinID:
XP_047059188
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Position
6:complement(218887281..218892246)
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AA seq
885 aa
AA seq
DB search
MESQSGKGDPSKSPVSAGGKGDPSKSPASDGGKGNPSKSPMSDGGKGGSSMTAKPQRLPI
RRPPEHATKGRRIMVLTNHFKVSLTRIDQIFYHYDVTLKYEDCKQALREGVCRKVMKRLY
ETYASELAYKVFAYDGKNGLFTIGPLPFNNNVFDVVLCDTSSGKTGTSRSPGGDGSPGPS
DKKRMKGAVYAKTFKVEIASTSAARIPMSAIAQEAIRVLDIILRQHSARQGCLLVRQSFF
RSEFGSIDLGSGVIGCRGFHSSFRPTQNGLSLNFDLSTTMVVRPGPVIDFLLFNQNIKDR
KRIDWGKAKRALNNLRIKTTHRKAEFKIVGLSEKTCYEQKFSRKQGEGNGTVEVTVYDYY
MDRWSIKLDNSADLPCLNVGKPDRPTYLPLELCHLLPLQRYKKSLSTLQRSKLVEGSRQK
PLDRMLTLSRALRDNNYDTEPMLRECGISISRDPMKVEGRVLQAPQLSVAHGRELYTPNG
RWNFNNDRFIRPTKVTTWGVVNFSARCNVSDLIRCLMESARKKGIQIDNCGAIIEEGGDM
KRERPAKRVEAMFKQIQDISNQKPAFLLCLLPEKNCDIYGPWKRECLAEHGIFTQCLVPP
ANIKDQYLTNVLLKINAKLGGLNSQLKSEINKGIPLVSTISTIIFGMDVSHGSPGRSDVP
SVAAVVSSLEWPNISKYRASVCTQAPRLETIDNLFKQVGDDDQGLIKPSLLEFYKSSRGK
KPEQIIIFRDGVGESQFDDVLNTELADIIEACKFLDDEWLPKFTVIVAQKNHHTRFFPHN
DNERNPNGTTRPTHYQVLHDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPIYYAHLAA
AQVAKFTRLDDMSETSSSHATQAAPALVPELPRLHDKVASSMFFC
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcaaagtggaaagggagatcccagcaagtcaccggtgtctgccggtggtaag
ggcgatcccagcaagtcaccggcgtctgacggtggcaagggcaatcccagcaagtcacca
atgtctgacggtggcaagggtggttccagcatgacggccaagcctcaaaggcttcccatc
agaaggccacccgagcatgccacaaaagggcggcgcataatggtgctcacaaaccatttc
aaagtctctctcacgagaatagatcagatattctaccactatgatgtgactctgaagtac
gaggactgcaaacaggctctcagagaaggagtgtgcagaaaggtgatgaagcggctgtat
gagacctatgcctcagagctcgcttacaaagtgttcgcttatgatggcaagaatggcctc
ttcaccattgggcctcttccatttaacaacaatgtgttcgacgtagttttgtgcgacact
tcatcaggaaagactggaacgagccgaagccccggaggagatggcagtccaggaccaagt
gacaagaagagaatgaaaggagcagtgtatgccaaaacattcaaggtggagatagcctcc
acctctgcggcaaggattccgatgagtgccattgcccaggaagctatacgggttctcgac
atcatactgaggcagcattccgcaagacagggttgtctcttagtccgacagtcttttttc
cgtagcgaattcggctccatagacttgggtagcggcgtgatcggttgtcggggtttccat
tctagctttcgacctactcaaaatgggctttcacttaactttgatttatccacaacgatg
gtggtgagacctggtcctgtgattgattttctgctattcaaccagaatattaaggaccgt
aaaagaattgattggggcaaagccaagcgtgcactgaacaatctaaggatcaaaaccact
cacaggaaagcggaatttaaaattgttggattatctgaaaaaacatgctatgaacagaag
ttctcacgaaagcaaggagagggcaacggtactgtggaggtaactgtttatgattactac
atggaccgttggtctatcaagctggataactctgctgatcttccctgtcttaatgtgggg
aagccagatcgtccaacatacctcccgctggagctttgccatctgctgccactacaaagg
tacaaaaagtctctctcgacgctgcaaaggtcaaaactggttgagggatccaggcagaag
ccgcttgacaggatgttgactttgtctcgtgcgttgcgtgacaataattatgataccgag
ccaatgctgagggaatgcggcatttcgatatctcgagatcctatgaaggttgagggtaga
gtccttcaggcaccacagttaagcgttgcacatggtagagaactttatacaccgaatggg
aggtggaatttcaataatgacaggttcattcggccaactaaagtgacgacctggggagtt
gttaatttttctgcacggtgcaatgttagtgatcttatcaggtgccttatggaatctgct
cgcaagaagggaattcaaatagacaattgtggtgctattattgaggaggggggtgatatg
aaacgggagcgtccagcaaaaagggtggaggctatgtttaagcagatacaagacatatcc
aatcaaaaaccagcatttctcctgtgtcttcttcctgagaagaactgtgacatctatgga
ccatggaagcgtgaatgccttgctgaacatggtatcttcacccaatgcttggttcctcct
gctaatatcaaagatcagtacctcacaaatgtactgttaaagataaatgccaagcttggc
gggttgaattcacagcttaaaagtgaaataaacaaaggcattcctctggtgtcaacgatt
tcaaccattatcttcggtatggatgtttctcatggttcacctggacgatctgacgtaccg
tcggttgctgcagtggttagttccttggagtggccaaacatctcaaaatacagagcttct
gtatgcactcaggcacccagactggaaacgattgataacttgtttaaacaagttggagac
gacgatcagggcctcattaaaccttcactactcgaattctacaagtccagtagagggaag
aaaccagaacaaattatcattttcagggatggagtaggtgagagccagtttgatgacgtg
ctgaacactgagctagctgatatcattgaggcatgcaaatttcttgatgacgaatggtta
cccaagttcacggtgatagttgcacagaagaatcaccacacaagatttttcccgcacaat
gacaatgagcgtaatcctaatgggactacaaggccaacacactaccaggtgctccatgat
gagataggcttctctcctgatgagctgcaggagctcgtgcattccctctcctacgtgtat
cagaggagcaccacagcaatctcagtagttgctcccatctactacgcacaccttgcagcg
gcgcaggtggcgaagttcaccaggctggatgacatgtcagagacatcgtcgagccatgct
acccaggctgcacctgccctggtgccagagctacctcgtctgcatgacaaagtagcgtca
tcgatgttcttctgctaa
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