Lolium rigidum (rigid ryegrass): 124666151
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Entry
124666151 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR34B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124666151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124666151
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124666151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124666151
NCBI-ProteinID:
XP_047059458
LinkDB
All DBs
Position
6:complement(206680185..206685920)
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AA seq
247 aa
AA seq
DB search
MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYTFDGYRLRVELAHGGRGQSYSHDPPRSFSGGRRGGVSRRSEYRVMVDGLPSS
ASWQDLKDHMRRAGDVCFSDVYREAGEIVGIVDYTNYDDMKYAIRKLDDTEFRNAFSRAY
IRVREYNARSRSRSVSVSYSRSRSYSRSLSRSRSPVSSASPGKSVSRSPSRSRNFSGSAS
PIDRWHS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcgcaacagctgcaccatttatgtgggcaatctccctggggacatccgagag
agggaggttgaggatctcttttacaagtatggccgtatcgtggatattgacttgaagatt
cctccaagacctcctggttacgcttttgttgagtttgaggatccccgtgacgctgatgat
gcaatatatggccgtgatgggtatacctttgatggctacaggttgcgggtggaattagct
catggtggaagaggtcaatcgtactcacacgatcccccaagaagctttagcggtggacgc
cgtggaggtgtttctaggcgctcggagtaccgcgttatggtggatggtttaccttcgtca
gcgtcatggcaagatctgaaggaccacatgcgacgggctggtgatgtctgtttttctgat
gtataccgggaggctggagaaattgttggaattgtggattatacaaactatgatgacatg
aaatacgcgattaggaagcttgatgatacagaattcagaaatgcattttcacgggcatat
atcagggtgagggagtataatgctagatcaagaagcagaagcgttagcgtctcttactca
agaagtcgcagctatagcagatcgctgtcaagatcccgatccccagtttcttctgcctct
cctggaaaatctgtgagcagaagccctagcaggagcaggaacttctctggctcagcatct
cctattgatcgttggcactcgtaa
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