Lolium rigidum (rigid ryegrass): 124666225
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Entry
124666225 CDS
T09103
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124666225
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124666225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
124666225
NCBI-ProteinID:
XP_047059527
LinkDB
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Position
6:72471471..72492535
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AA seq
588 aa
AA seq
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MDFSSSASPVAAEPAAATGRYTFSPRLRWQPEVEEYFASAYGRDHFARISQALAHPSCYS
CIRVNTLKSSTDVVMQKLLSLVNQSELCGGMGGLEIGEQNGEEQAHEGSYLVHKCPYSGL
ENVLFIQGSGPHVLHCDGQPGQSIKEIIVSRKCAESVLRGAQVYVPGVLACSSHVEKGDK
VAVSVAVEQPVKDSGWAVGITRGIVLQGLRSDAHYEERKGLYIGQGIAAMSRAGIFRVLH
GVAVEMTERVYKLPSFNDVLEGEIFLQNLPSIVAARVLDPQQGERILDMCAAPGGKTTAI
AILMRDKGEIVALDRSHNKVMGILNLADEMGLSCIKAYKLDALKSVRKMNEARNLGVADN
CSESIVTMEENSVPCHTTTVARVTNAGEDSLTTTVLQTDDPKPDAGRYVSNADLRKNLRR
MRNGTGRSNISGGRVEDSKGFFPSSFDRVLLDAPCSALGLRPRLFAGEETLESLRKNATY
QRRMFDQAVKLVRPGGVIVYSTCTINPGENEGLVRYALDTYKFLSLGSQHPKVGGPGIIG
SCKLPNKAYTEEWLTEHEAQLVQRFDPSSSLDTMGFFIAKFNVGEKED
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcttcttccgcctcccccgtggcggcggaacctgctgctgctacgggccgg
tacacgttcagcccgaggctgcggtggcagcccgaggtcgaggagtacttcgcctccgcg
tacggccgcgaccacttcgcccgcatctcccaagccctcgcgcacccgtcttgttactct
tgtatccgtgtgaataccctaaaatcttcgactgatgttgtcatgcaaaaactcctcagt
ttggttaatcaaagtgaactttgtggtggaatgggtggtttggagataggtgagcagaat
ggtgaagagcaagcacatgaagggagttacctggtgcataagtgcccgtattctggcctt
gaaaatgttttattcattcaaggttcagggccacatgttctgcactgcgatggccaacct
ggtcaatctatcaaggagataattgttagtcgaaaatgtgcagagtcagttcttcgagga
gcccaggtgtatgtccctggtgttttggcttgcagttcacatgttgaaaagggtgacaag
gttgcagtctcagtcgctgttgagcaacctgttaaggatagtggttgggctgttggtata
acacgaggaatcgttctacaggggttgcggtcagatgcacattatgaagagagaaagggt
ctgtacattggtcaagggatcgctgcaatgtcaagggctggaatttttcgtgttcttcat
ggagttgcagtagagatgactgagagggtgtacaaactcccatcttttaatgatgttctt
gaaggtgaaatatttcttcaaaatttgccaagtattgtggctgctcgtgtccttgatccc
cagcaaggagagcgaatactggatatgtgtgctgctccaggaggaaaaacaacagcaatt
gctatccttatgagggacaagggagaaattgttgcccttgatagatctcacaataaggtg
atgggtattttgaacttggctgatgagatgggtctaagttgtataaaagcttataaactt
gatgctctcaaatctgtacggaagatgaatgaggcaagaaatcttggtgtggcagataac
tgctctgaatctattgtgacaatggaggagaactctgtcccttgccatactacaaccgtt
gccagggttactaatgcaggtgaagacagcttaactacaacagttttgcagactgatgac
ccaaaaccagatgctggaaggtatgttagtaatgcagacctcaggaagaatttaaggcgt
atgaggaatggaacaggaagaagtaacatctctggaggtagagttgaagactcaaaagga
ttttttcctagcagctttgatcgtgtcctccttgatgctccatgttctgcacttgggttg
agacctcggctctttgctggtgaggaaacattggaatccctgagaaagaatgcaacatat
caaaggagaatgtttgatcaagctgtcaagctagttcgccctggtggggtaattgtttat
tccacgtgtactattaacccaggagaaaacgagggtttggtcagatatgctttggataca
tacaaattcctgtcactaggatcacagcacccaaaagttggaggacctggtattattggc
tcgtgtaagctgcccaacaaggcatatactgaggagtggttgacggagcatgaagcacaa
cttgtccagaggtttgatccgtcatcatcgctggatactatgggtttcttcattgcgaag
ttcaatgttggagaaaaggaggactga
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