Lolium rigidum (rigid ryegrass): 124666316
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Entry
124666316 CDS
T09103
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124666316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124666316
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124666316
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
124666316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
124666316
NCBI-ProteinID:
XP_047059615
LinkDB
All DBs
Position
6:68351971..68362115
Genome browser
AA seq
1540 aa
AA seq
DB search
MEDPSADPAASASGRRLRTRGAEAAAPARSAALERIRARREGGARAAAVQVRMEDPIYDT
VAEEDYAALVARRRRDAGAFIIDDDGLGYVDDGREEDWTHRALPSSSDEGSGGEDGAAPR
KRKQPRPPQARRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFKKPGTDRAPAADSIVD
DVIAEFAPDENDREERRRRVGRISAPTPLPPPVAHINKPVKAALYPEMEVRSDNNGFEPD
VVSDHGNDMDVEPIPEVELKQDVEMQPKSEATQGSSTELADVSKNLEELKQEANGEVKVE
KAHRLNAKIKAEGSMNRDVSSATAGWMKICGEGENAGGAGEAAADGNVDVDESSEFELKD
GALPFYILDAYEEPFGINSGTVYLFGKVQIGKGFHSCCVVVKNMQRCIYAIPSSSVFPRD
AISRTEKNSTNSDALPLLRATLHELASGLKSEVAEKLSDLNISNFVMTPVKRNYAFERTD
IPTGEQYVLKINYPYKDTAVPSDLRGEHFHALLGTNNSALELFLVKRKIKGPTWLSISKF
VTCPSTQRVSWCKFEVTVDCPKDISVLMTSAALEVPPAVVAAVNLKTIINEKHNVHEIVS
ASVICCHRVKIDSPMRPEDWQKRGMISHFTVMRKLEGSIFPIGLNKEASDRNQKAGSNVL
ALESSERALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSSMWSKIGRLRR
SIMPRLTKGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKDR
REVSPHDIPPMFQSSGTLLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTL
QGARAQRVEYLLLHSFHAKKFIVPDKFARNKEVNSAKRKMNADTEGANAADGVTDPSVDD
EVHHGDQGKARKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEFNICFTTVERSS
DGNLPNLPTSKATGVLPELLKSLVERRRMVKKWLKTASGLKMQQLDIQQQALKLTANSMY
GCLGFSNSRFFAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIYTGLDDIS
RAKAIAGKVIQEVNKKYRCLEIDLDGVYKRMLLLKKKKYAAIKVTLDGTLRENIERKGLD
MVRRDWSLLSKEIGDFCLNQILSGGTCDDVIEAIHNSLVQVQEQMRNGQIELEKYIITKS
LTKAPEDYPDAKNQPHVQVASRLKQNGFSGCSAGDTVPYIICSQQDSDNTHSGGIAQRAR
HPDELKRDPNKWMIDIDYYLSQQIHPVVSRLCASIEGTSPARLAECLGLDSSKFQSRSIG
SSDQDTSTTLLSVIDNEDERYRGCEQLRLSCPSCSSAFECPPVSSLIASPSDPNEGKDAS
VNFWRRMRCPKCPDDTDECRVSPAMLANQIKRQADNFINQYYKGLLICDDEGCKYSTHTV
NLRVIGDSERGTICPNYPQCNGRLVRQYTEADLYRQLSYFCYVLDATRCLQKLDQKTRLP
FEKEFAILNQTINLAFVEIQKIRDRCAFGWVQLTDLAVSI
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccgtccgccgaccccgccgcatccgcatccggccgccgcctgcgcacccgg
ggcgccgaggccgcggcgccggcgcgctccgccgcgctcgagcgcatccgcgccaggcgc
gagggcggcgcccgcgccgccgccgtccaggtgcggatggaggacccgatctacgacacc
gtggccgaggaggactacgcggcgctcgtcgcgcgccgccgcagggacgcgggcgccttc
atcatcgacgacgacgggctcggctacgtcgacgacggccgtgaggaggactggacccac
cgcgccctcccctcctcctccgacgaggggtccggcggcgaggacggcgccgccccccgc
aagcgcaagcagccgcgcccgccccaggcgaggcggcccccgcagcagtccgccgcggcc
gcgtccctctccgccgccgccgccatgatgggcaagcagcgcctctcctccatgttcacc
tcctccgtcttcaagaagcccggcaccgaccgcgcgcccgccgcggacagcatcgtggat
gacgtcatcgccgagttcgcccccgacgagaacgaccgcgaggagcgccgtcgtcgcgtt
ggtaggatttctgcccctacgccgctgcctccaccagtcgcccacattaataagcccgta
aaagcagccctataccctgaaatggaggttagatcggataacaacgggttcgagcctgat
gtcgtttccgaccatggaaacgacatggatgtggaaccaattccagaggtggaactcaag
caagatgtggaaatgcagcccaaatcagaagcaacccaaggttctagtactgaattggca
gatgtcagtaagaacttggaggagctgaagcaggaggctaatggggaagtgaaggtagag
aaggcgcaccgcctgaatgcgaagattaaggcggaggggagcatgaacagggatgtatcg
agtgcgacagcaggctggatgaagatatgtggggagggggagaatgcaggaggtgcggga
gaggcggctgctgatggtaacgtagatgtggatgaaagctcagagtttgaactcaaggat
ggagcactgcccttctatatactggatgcatatgaggagccctttggcatcaattcaggc
acagtgtatttgtttgggaaggtgcaaataggcaaggggttccatagttgctgtgtggtt
gtaaaaaatatgcaaaggtgcatatatgcaatcccaagcagttcagtttttccaagggac
gccatatcaaggacagagaagaactctacaaattcggatgctttgccattacttcgagca
accctacatgagttggcatctggactaaagagcgaagtagctgagaagttgtctgacctc
aacatttcaaattttgtaatgactccagtcaagaggaactatgcatttgagaggacggat
ataccaaccggtgagcagtatgtcctgaaaatcaattacccatacaaggatacggcggta
ccatcagaccttagaggtgaacatttccatgcgttacttgggacaaacaatagtgctctt
gagctgtttctcgtcaaaaggaagatcaagggtcctacatggctatcgatttccaaattt
gtgacatgtccatctacacagcgggtcagctggtgtaaatttgaagttacagttgattgt
ccaaaagacatttctgttttgatgacaagtgccgcactggaagttcctccagctgtagtt
gcggctgttaatcttaaaacaatcataaatgagaaacacaatgtgcatgagattgtatca
gcatccgtcatatgctgtcaccgggtgaaaattgatagtccaatgcgccctgaagattgg
cagaaacggggaatgatcagccattttactgttatgcgcaagcttgaaggtagcatattc
cctataggcctcaacaaggaagcttctgataggaaccaaaaagctggtagcaacgtgctg
gcactagaaagcagtgaacgtgctttgttaaaccgcttgatgattgagcttagtaaactt
gattgcgacgtacttgtcgggcacaacatctcgggattcgacttggatgtccttttgcac
cgtgctcagacctgcaaagtaccgagcagcatgtggtccaaaattggtcgtcttagaagg
tcaataatgccaaggcttaccaaaggaaacaccctatatggttctggggcaagtccagga
attatgtcctgcattgctggtcgtctcctctgtgacacctacttatgctctcgtgatctt
ctgaaggaggttagttattccttgacacaacttgcagagacacaactgaaaaaggacaga
agggaggtttctccgcatgatatacccccaatgttccaatcatctggaacacttctaaag
ctggttgaatatggcgagactgatgcatggctttctttggagctcatgttccacttaagc
gttctcccgctgacacgtcaattgacaaatattagtggtaatttgtgggggaaaactctc
cagggtgctagagctcagagggtagaatatctactgttgcattcattccatgcaaaaaaa
ttcattgtaccagataagtttgcacgcaacaaggaggtgaactctgcaaaaagaaaaatg
aatgctgatactgaaggtgcaaatgctgctgatggtgttactgatccatccgttgatgac
gaggtgcatcatggtgatcaaggtaaagcaagaaaaggtccttcatatgccggtggcttg
gttttggagcctaaaaaaggtctatatgacaagtatattctactcctggacttcaacagt
ctttatccttccataattcaggaattcaatatctgcttcactactgttgaacggtcttct
gatggcaatcttcctaacttgccaacttcaaaggctactggtgttttgcctgagttgctg
aagagcctggtcgagaggagaagaatggttaaaaagtggctcaagactgcttctggtctt
aaaatgcagcaacttgatattcaacagcaagctttaaagcttactgcaaatagcatgtac
ggttgcttgggcttctccaattctaggttttttgcaaagccacttgctgagcttattaca
ctacaaggaagagagatcttgcaaaacactgttgatctggttcagaataatttgaactta
gaggttatttatggtgacacagactccataatgatatatactggactggatgacatctcc
agggcaaaagcaattgcaggaaaggtcattcaggaggtgaacaagaagtaccgttgtctg
gagattgatcttgatggtgtatacaaacgaatgttgcttctcaaaaagaagaaatatgct
gccattaaagtgacactagatggtactttgcgagagaacattgagcgcaagggacttgat
atggtcagacgtgattggagtttgctgtcaaaagaaattggagacttttgcctaaatcaa
attttgtctggagggacatgcgatgatgttattgaggcgatacataattctcttgtccag
gtacaagagcagatgagaaatggtcaaatagagcttgaaaaatatatcatcacaaagagc
ctaacgaaagcgccagaagattatccagatgctaaaaaccagcctcatgtccaagttgct
tcaagactgaagcaaaatggtttctctgggtgctctgcaggtgatacagttccttacatt
atttgctcgcaacaggactcagataatacacattctgggggaatagctcaaagggcaaga
catcccgatgagctaaaaagagaccctaacaagtggatgattgacattgactactatttg
tcacagcagattcatcctgttgtttctcgtctgtgtgcttcaatcgagggtactagccca
gcacgactggctgaatgtcttggacttgattcatccaagttccaatcaagatctattggg
tctagtgaccaagacacttctaccacgctcttatctgtaattgacaatgaagatgagaga
tatcgtggctgtgagcaactgcgcttatcatgtccaagctgttccagtgccttcgagtgc
ccccctgtatctagtctgattgctagtccatctgacccaaatgaaggaaaagacgctagt
gtgaatttctggcgtcggatgcggtgcccaaaatgtccagatgacactgatgagtgcaga
gtttctcctgctatgctcgccaaccagataaaaagacaggctgataatttcatcaatcag
tactataagggtttactgatatgtgatgatgagggttgcaaatattcaactcataccgtg
aaccttagagtgattggagattctgagagaggaaccatctgcccaaactatccacaatgc
aacggccgtctagtaagacagtatacagaggcagatctatacaggcaattgtcctacttc
tgctatgtacttgatgcaacccggtgtcttcagaagttggaccagaagactcggcttcct
tttgagaaagagtttgcaatattaaaccaaaccataaacttggcatttgtggagattcag
aaaatccgggacagatgtgcatttggatgggtgcagttgacagatctagcagtgtcaatc
tga
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integrated database retrieval system
