KEGG   Lolium rigidum (rigid ryegrass): 124666498
Entry
124666498         CDS       T09103                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124666498
Spliceosome [BR:lrd03041]
 Complex B
  Other components
   Complex B specific factors
    124666498
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 LisH_TPL Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Aladin WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_VPS8 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_SPT8 DUF7165 Beta-prop_WDR19_1st VPS8_N Beta-prop_IFT122_2nd Beta-prop_HPS5 PROPPIN Beta-prop_IP5PC_F 7TMR-HDED
Other DBs
NCBI-GeneID: 124666498
NCBI-ProteinID: XP_047059804
LinkDB
Position
6:204462760..204468221
AA seq 517 aa
MASSASALEIEAGDVVKIMLQFCKENSLHQTFQTLQNECQVSLNTVDSMDTFVADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEEPERYL
RLEHLLVRTYFEPNEAYQESTKEKRRAQIAQAIASEVSVVPPARLMALITQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEEAYPTTLAHQIKFGKKTHPECARFSPDGQYLVSSSVDG
IIEVWDYITGKLKKDLQYQADESFMMHEEAVLCVDFSRDSESLASGSMDGKIKVWRIRTG
QCLRRLERAHTKAVTSVTFSRDGSQILSTSFDTTARIHGLKSGKMLKEFRGHTSCVNCAI
FSTDGTRVITASSDYFVKVWDSKTADCLQSFKPPPPLRGGEASVNSVHLFPKNSDHIVVC
NKTSSINIMTLQGQVVKSFSSGKQVGGDFVAASVSPKGDWIYCVGEDMKLYCFSLQSGKL
ENLMKVHEQDVIGIAHHPHRNLLATYAVDCTMKIWKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcttcggcgtccgccctcgagatcgaggctggcgacgtggtgaagataatgctt
cagttctgcaaggagaactccctgcaccagacgttccagacgctgcagaacgagtgccag
gtctcgctcaacaccgtcgacagcatggacaccttcgtcgccgacatcaatgccggccgc
tgggacgccgtgctgccgcaggtcgcccagctcaagctgccgcgcaagaagctcgaggac
ctctacgagcagattgtgctggagatggcggagctccgtgagctcgacaccgcccgagct
atccttcgccagacgcaggtcatgggcgtcatgaaacaggaggagcctgaacgctacctc
cggctagagcacctccttgtccggacatactttgaacccaatgaggcttaccaagaatcc
accaaggagaagcgccgtgcgcagattgcccaagctattgcttccgaagtttcagtagtc
ccaccagctcggctaatggcgctgattacccaggctttgaaatggcaacagcaccaaggg
ttgttaccccctggcacacagttcgatttattcagaggaaccgctgcaatgaagcaagac
gaagaagaggcatatcctactactttggcacatcaaataaagttcggaaagaaaacccac
cctgaatgtgctcgattctcacccgatggtcagtaccttgtttcatcgtcagtggatgga
atcattgaagtatgggattatattaccggcaagctgaaaaaggatctgcagtatcaagcc
gatgaaagctttatgatgcacgaggaggctgtgctctgtgttgattttagtagagattct
gaatcgctggcatctggatcaatggatggaaaaattaaggtttggcgtatacgaactggg
cagtgcttgcggcgcctggagcgtgcacatacgaaagctgttacaagtgttacattttca
cgtgatggatctcagatattgagtacctcttttgacactaccgcaagaatccatggcctt
aagtctgggaagatgctaaaagaattccgcggccacacctcctgtgtgaactgtgccatc
ttttctaccgatggtactcgcgttatcacagcttccagtgattattttgtgaaggtatgg
gattcaaaaacagcagactgtttgcaatcattcaagcctcctcctcctttgaggggaggg
gaagcatctgttaactctgtccatttgtttccgaagaacagtgatcacattgttgtatgc
aataagacttcgtcaattaacatcatgactttacaaggacaggttgtaaagagtttctcg
tctgggaaacaggtaggaggagattttgttgcagcttccgtttcaccgaaaggagattgg
atatattgtgttggtgaagacatgaaattgtattgctttagcctacagtccgggaagctg
gagaatctaatgaaggtccatgaacaggatgtgattggcattgcgcaccaccctcacagg
aacttgcttgccacctatgccgtagattgtacgatgaagatatggaaggcttga

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