KEGG   Lolium rigidum (rigid ryegrass): 124666675
Entry
124666675         CDS       T09103                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124666675
Spliceosome [BR:lrd03041]
 Complex B
  Other components
   Complex B specific factors
    124666675
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st LisH_TPL WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Ge1_WD40 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F PALB2_WD40 Mala_s_1-like zf_topless
Other DBs
NCBI-GeneID: 124666675
NCBI-ProteinID: XP_047059966
LinkDB
Position
6:176578288..176589656
AA seq 515 aa
MASSASALEIEAGYVVKMMLQFCKENSLPQTFQTLQNEYQVLHNTGDSMDTFIANINAGC
WGAVLLQVAQLNLPRKKLENLYEQIVLEMVELGELDSARAILHQTQVMGVMKQEEPERYR
RLEHLLVCTYFDPNKAYQQSTKENRRAQIAQAIASEVSVVPPVRLVTLITQALKWQQHQG
LLPPDTQFDSFRGTAAMKQDEEEAYPTTLSHQIKLGKRTHAECARFSPNGQFLVSCLTDG
IIEVWDYTSGKLTKDLLYQTDESFMMHEVAVLCVDFSRLSDRLASGSADGEIKVWCIQTG
ECLQRLENAHERGVTSVTFSRDESQILSTSFDTTARIHCLQSGKMLKEFSGHTSFVNNGI
FSTDGTRVITASSDCTVKVWDLKTADLLQSFKPPPPLRGGDAVVNSVHLFPKNSDHIVVC
NKSSSIFIMTLQGQVVKSFSSERKGDFVAASVSPKGEWIYCVGEDMKLYCFSQQSGKLEN
LMKVHEEDVIGIAHHPHRNLVATYAVDCMMKLWKD
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcgtcttcggcgtccgccctcgagatcgaggctggctacgtggtgaagatgatgctt
cagttctgcaaggagaactcgctgccccagacgttccagacgctgcagaacgagtaccag
gtactgcacaacacgggcgacagcatggacaccttcatcgccaacatcaatgctggctgc
tggggtgccgtgctgctgcaggtcgcccagctcaacctgccacgcaagaagcttgagaac
ctctacgagcagattgttctggagatggtagagttaggtgagctcgactccgcccgtgct
atccttcaccagacccaggtgatgggcgtcatgaaacaggaggaacctgaacgctaccgc
cgactagagcacctccttgtctgcacatactttgatcccaataaggcttaccagcagtcc
accaaggaaaaccgtcgtgcgcagattgcccaagctattgcttccgaagtttcagtagtc
ccaccagttcggctagtgacactgattacccaggctttgaaatggcaacagcaccaaggc
ttattaccacctgacacccagttcgattcattcagaggaaccgctgcaatgaagcaagat
gaagaagaggcatatcctactactttgtcacatcaaataaagttggggaagagaacccat
gctgagtgtgctcgattctcacccaatggtcagttccttgtttcatgcttgacggatgga
atcatcgaagtatgggattatactagcggcaagctaacaaaggatcttctgtatcaaacc
gatgaaagctttatgatgcatgaggtggctgtgctctgtgttgattttagtagactgtct
gatagacttgcatctggatcagcggatggagaaattaaggtttggtgtattcaaactggg
gagtgcttgcagcggctcgagaatgcacatgagagaggtgttacaagcgtaacattttca
cgtgatgaatctcagatattgagtacctcttttgacactactgcaagaatccactgcctt
cagtcagggaagatgctaaaagaattcagtggtcacacctcatttgtgaacaatggcatc
ttttctaccgatggtactcgtgttatcacagcttcaagtgattgtactgttaaggtatgg
gatttgaaaacagcagaccttttgcaatcattcaagcctcctcctcctttgaggggagga
gatgcagttgttaactctgtccacttatttccaaagaacagtgatcacattgttgtctgc
aacaagtcttcgtcaatattcatcatgactttacaaggacaggttgtaaagagtttctcg
tctgaacggaaaggagattttgttgcagcttcagtttcaccgaaaggagaatggatatat
tgtgttggtgaagacatgaaattgtattgctttagccaacagtcggggaagctggagaat
ctaatgaaggtccatgaagaggatgtgattggcattgcgcaccaccctcacaggaacttg
gttgccacctatgccgtagactgtatgatgaagttatggaaggattaa

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