Lolium rigidum (rigid ryegrass): 124666840
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Entry
124666840 CDS
T09103
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124666840
Membrane trafficking [BR:
lrd04131
]
Autophagy
Other autophagy associated proteins
Others
124666840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
CPSF_A
Beta-prop_WDR19_1st
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
DUF7099
Beta-prop_IFT80_2nd
PEP5_VPS11_N
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
124666840
NCBI-ProteinID:
XP_047060126
LinkDB
All DBs
Position
6:36016635..36022617
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AA seq
496 aa
AA seq
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MATTPNPPNPSSLLDDDLPPEPQPKGRDNNSKTNKVWKPKVRDPPEMPPETDPETPEQEP
SEPDQDPEPPLPTDAIEPTPSGGEEDESGDDNSASVSSVSSALAAADLAPPTTGPSGADR
PFPAAKDLLHISFNQDYGCFAAGTKSGFRIFNCDPFREIFRRDLGPTAPNPPTSQPQDTP
TPPLSGGGGGVGVVEMLFRCNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFKSPVR
AVRLRRDRIVVVLDAKVYVYNFADLKLVHHIETAPNPRGLCAVSQQPGATVLVCPGAQKG
QIRVEHYGARKTKFINAHSSRVACFALSQDGRLIATASTKGTLVRIFNAAEGNLLQEVRR
GADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTTNDKPLPAPEPDVPHMSPSF
SFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQYDPVNGGE
MQQLECHNFLKPSDQP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgcccaacccaccaaaccctagctccctcctcgacgacgacctgccgccg
gagcctcagcctaagggccgggacaacaacagcaagaccaacaaggtctggaaacctaag
gtgcgggaccccccagagatgcccccggagacggatcccgagacgccggagcaggaaccg
tcggagccggaccaggacccggagccgccgctccccaccgacgcaatcgagcccaccccg
tccggcggggaggaggacgagagcggcgacgacaactccgcctccgtctcctccgtctca
tccgccctcgcggcggccgacctggctccccccaccacgggaccatccggcgccgaccgc
cccttcccagcagccaaggacctgctccacatctccttcaaccaggactacggctgcttc
gcggccggcacaaagtccggcttccgcatcttcaactgcgaccccttccgcgagatcttc
cgccgcgacctcggccccaccgcccccaacccccccacctcccagccccaagacaccccg
accccacccctcagcggcggcgggggcggggtcggggtcgtcgagatgctcttccgctgc
aacatcctcgcgctcgtcggcggcggcgacgcgccccactacccgcccaacaaggtgatg
atctgggacgaccaccagagccgctgcatcggggagctctccttcaagtcgcccgtgcgc
gccgtgcgcctccgccgcgaccgcatcgtcgtcgtgctcgacgccaaggtctacgtctac
aacttcgccgacctcaagctcgtccaccacatcgagaccgcgcccaaccccaggggcctc
tgcgccgtctcccagcagcccggcgccaccgtgctcgtatgccccggcgcgcagaaggga
cagatcagggtcgagcactacggggccaggaagaccaagtttatcaacgcgcactcgtcc
cgcgtcgcgtgcttcgcgctgtcgcaggatgggaggctcatcgccaccgccagtaccaag
gggacgcttgtaaggatcttcaatgccgccgagggaaaccttctacaagaagtaaggaga
ggagctgatagagcagaaatatatagcttggctttctcaaataatttacagtatttagct
gtatctagtgataaaggaacaattcatgtgttcaatttaaagataaacgtgggtttgacg
acaaatgataagcctctgccagctccagagcccgatgttccccatatgagtccatcgttt
tcttttattaagggcgtgttacctaaatatttccactccgagtggtctgttgctcaattt
aggctccatgagggtgagcagtacattgttgcatttggccatgagaagaatactgtggct
gttgttggtatggatggaagcttctatcgctgccagtatgacccagtcaatggaggagaa
atgcagcagctggagtgccacaatttcctaaaaccatcagaccaaccgtag
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