Lolium rigidum (rigid ryegrass): 124666943
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Entry
124666943 CDS
T09103
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124666943
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124666943
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124666943
NCBI-ProteinID:
XP_047060237
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All DBs
Position
1:7976780..7978099
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AA seq
439 aa
AA seq
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MARSPLHVLLYVLATAAVAAAAETAVHKPPPTTNVTSDEEYWAKRAEEARAYSRAAYVAD
PVAELNRFNQDVLRATTRRSLARYRGPCLATNPIDRCWRCRSNWASDRQRLATCARGFGH
SALGGAGGRTYVVTDPSDDELIIPKKGTLRYGVIQDRALWIVFARSMVIKLSQELIVNSN
KTIDGRGAQVHITGAQITLQGVKHVIIHGVRIHHSVPHSGGMIRDSKHHYGHRTRSDGDG
ISILSSSNIWIDHVSMWSCADGLIDVVSGSTAITVSNSHFTKHDHVMLFGASNSETQDAM
MQITVAFNHFGKGLVQRMPRCRFGFFHVVNNDYTHWQMYAIGGNRDPTIISQGNRFIAPD
DGNAKEVTKREYAPYSEYKDWVWKSQGDVMMNGAFFNESGGQNERRYGQMDFIPAKNGKY
VGKLTQFAGTLGCRVGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggagccccctccacgttctgctgtacgtcctcgccacggcggccgtggccgca
gcagcggaaacggcggtgcacaagccgccgccgaccaccaacgtcacctccgacgaggag
tactgggcgaagcgcgccgaggaggcccgcgcgtacagccgcgccgcgtacgtcgccgat
cccgtcgccgagctcaaccgcttcaaccaggacgtgctgcgcgccacgacgcgccgttcc
ctcgcccgttaccgtggcccctgcttggccaccaaccccatcgaccggtgctggcgctgc
cggtccaactgggccagcgaccgccagcgcctcgccacctgcgcgcggggcttcggccac
agcgccctgggcggcgccggcggcaggacgtacgtggtcaccgaccccagtgacgacgag
ctcatcatccccaagaagggcacgctccggtacggcgtgatccaggaccgcgccctgtgg
atcgtcttcgcgcggtccatggtgatcaagctctcccaggagctcatcgtgaacagcaac
aagaccatcgacgggcggggcgcgcaggtgcacatcacgggggcgcagatcacgctgcag
ggggtgaagcacgtgatcatccacggcgtgcgcatccaccactccgtcccgcactccggc
ggcatgatccgcgactccaagcaccactacgggcaccgcacgcgcagcgacggcgacggg
atctccatcctctcctccagcaacatctggatcgaccacgtctccatgtggagctgcgcc
gacgggctgatcgacgtggtcagcggctccaccgccatcaccgtgtccaacagccacttc
accaagcacgaccacgtgatgctgttcggcgccagcaactcggagacgcaggacgccatg
atgcagatcacggtggcgttcaaccacttcggcaaggggctggtgcagcggatgccgagg
tgcaggttcggcttcttccacgtcgtgaacaacgactacacgcactggcagatgtacgcc
atcggcggcaaccgggacccgacgatcatcagccaggggaaccgcttcatcgcccccgac
gacggcaacgccaaggaggtcaccaagcgggagtacgcgccatacagcgagtacaaggac
tgggtgtggaagtcgcagggggacgtcatgatgaacggggccttcttcaacgagtccggc
ggccagaacgagcgcaggtacggccagatggacttcattccggccaagaacggcaagtat
gtcggaaagctcacgcagttcgccggcacgctaggatgccgcgtcggcaagccgtgctga
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