Lolium rigidum (rigid ryegrass): 124667088
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Entry
124667088 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124667088
03015 mRNA surveillance pathway
124667088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124667088
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124667088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124667088
NCBI-ProteinID:
XP_047060371
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All DBs
Position
6:complement(20721036..20725550)
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AA seq
432 aa
AA seq
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MAKPRRGRSGSRSSSGSSSRSASSGSGSSRSRSRSRSLSSSSPSRSRSPPAAKRSSPGAR
KGRSPSPAPKKGSPSRKGRSPSPPPKKASPPRKSSPAPESVVLHVDHLSRNVNEAHLKEI
FGNFGEVVNVELSMDRIVNLPRGYGYVEYKKRADAEKALLYMDGAQIDGNVVKLRFTLTP
RQKPSSPTKPLPPPPKRDAPQNDKGATSVEKDAQQRPREPSPRRKPPSPPRKRSPPIRRG
DSPIRRRPDPSPVRRGRPGSPIRRRSPSPPRRHRSPMRXVVXLSFLYLGYFLELLTVVSL
LSTRRGRGSPSPRRRSPGPLRRSPGPPRRRSPPPRRMRSPPRRPPPPPPRRHSRSPPPRR
PLHSRSRSISPRRGRGPPLRRGRSDSSYSASPSPPRKGPRRVSRSRSPRRGPRGRSSSGS
GSSSSPSPRPRK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccgccgcggccgctccggctcgcggtcctcctcgggctcgtcctcccgc
tccgcgtcctccggctccggctcgtcccgctcgcgctcccgctcgcgctccctctcctcc
tcctccccgtcccggagccgctcccctcccgccgccaagcgcagttcacctggagcgcgg
aaaggtcgatcaccttcaccagcccctaagaaaggttcgccatcaaggaaaggccgctca
ccatcgcctccacctaaaaaagcttcacctcctaggaaatcatctcctgctcctgagtcg
gttgttctacatgttgatcatctatccaggaacgttaatgaggcccatttaaaagagata
tttggaaattttggcgaagtggtgaatgtggagctatcaatggaccgaattgttaatctt
cctcgtgggtatggatatgttgagtacaagaagagggctgatgctgagaaggctcttctt
tacatggatggtgctcaaattgatggaaatgttgttaagttgagattcacgctgacacca
cgccaaaagccttcttcacctacaaagccactgccccctcctccaaaaagagatgctcct
cagaatgataaaggtgctactagtgttgaaaaggatgctcagcagcggcctagggaacca
tctccacgaagaaagccaccttcacctccgcgtaagcggtctcccccaattcgtcgtggc
gattctccgattcgtcgccgaccagacccatcccctgttaggcgtggcagaccaggatct
ccaattagaagacgttctccttcaccacctagaaggcataggtcaccgatgaggtgagtt
gtctaactttcattcttatatctagggtattttctggaattgctgacagtcgtctcgcta
ctgtcaactaggaggggtcgtggcagcccatcaccacgcagacgctcccctgggcctctt
aggcgctcacctgggcctcctagaagacggtcaccacccccaaggagaatgagaagcccc
ccaagaaggccaccaccaccacctccacgtcgtcatagtcgttcccctcctcctcgccgc
cctcttcactctcgctccagatcgatatctcctcgcaggggccgagggccgccactgagg
cgtggaaggtcagattcatcctattctgcatcacccagtcctccaaggaagggaccaaga
agggtatcaaggagccgcagtcctagaaggggtcctagaggaaggagctccagcggtagc
gggagcagcagctcaccttcccccaggccgcgcaagtag
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