Lolium rigidum (rigid ryegrass): 124667258
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Entry
124667258 CDS
T09103
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124667258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124667258
04147 Exosome [BR:
lrd04147
]
124667258
04090 CD molecules [BR:
lrd04090
]
124667258
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124667258
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124667258
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124667258
CD molecules [BR:
lrd04090
]
Proteins
124667258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_15
AAA_24
AAA_30
AAA_21
DUF87
DLIC
ERG2_Sigma1R
Motif
Other DBs
NCBI-GeneID:
124667258
NCBI-ProteinID:
XP_047060517
LinkDB
All DBs
Position
6:68087126..68094996
Genome browser
AA seq
1257 aa
AA seq
DB search
MDAAAPGTGTDGETKKEEVGMDRGKKVSFTGLFRYSDGTDLLLMLVGTVAALANGMSQPV
MTVIFGDVIDAFGGATTGNVLNRVNKAVLNFVYLGIGTAVVSFLQVACWTITGERQATHI
RSLYLKSVLRQDISFFDVEMTTGKIVSRMSGDTVLVQDAIGEKVGKFLQLIASFIGGFVI
AFLKGWLLSVVMLASIPPVVIAAAAVAKVLSTISSKGQQSYGDAGNVVEQTIGAIKTVAS
FNGEKHAIRAYNKLIHKTYKTTVKEGLANGTGMGSIFLIFFSSYGLVIWYGAKLILNKGY
TGGKVITILFAIMTGAMSLGNATPCMTAFAQGQSAAHRLFTTIKRKPEIDPDDRTGKQLE
DIRGDVELKDVYFSYPARPDQLIFDGFSLHVSSGTTMAIVGESGSGKSTVISLVERFYDP
QAGEVLIDGINIKSVQLDSIRGKIGLVSQEPLLFMTSIKDNIMYGKEDATFEEIRRSAEL
ANAANFIDKLPNGYDTLVGQRGAQLSGGQKQRIAIARAIIKNPKILLLDEATSALDVESE
RIVQEALNRIMVDRTTLVVAHRLTTVRNADCISVVQQGKIVEQGPHDELVLNPDGPYSQL
IRLQESREEEQKIDRRRLDPMSKNTSLSLKRSISRGSAGNSSAHSSTLPFMMPEKNDTHG
GNQTELHGDGEISTKAPLGRLARLNKPEVPIILLGSLAAAVHGVLFPMFGVMIANAIKVF
YAPPDKMRKDSSFWALMCVVLGILSIISIPAELFLFGIAGGKLIERIRSMSFQSIVHQEV
AWFDDPKNSSGALGARLSVDALNVRRLVGDNLALTVQIIATLITGFVVAVMADWKLSLII
LCVIPLAGIQGYAQVKFLKGFSQDAKMMYEDASQVATDAISSIRTIASFCSEKKITTIYD
HKCEASMSQGVRTGIVGGIGFGFSFLMLYLTYGLCFYVGAQFVRHGQSDFGGVFKVFFAL
VLATIGVSQSSALASDSSKAKDSAISIFALLDRKSEIDSSSNEGLTINEVKGNIDFQHVS
FKYPTRPDIQIFSDFTLHIPSGKTVALVGESGSGKSTVIGLLERFYNPDSGTVSLDGVEI
KSLNINWLRDQMGLVSQEPVLFNDTIRANIAYGKDGEVTEEELIAAAKASNAHGFISSLP
EGYDTTVGERGIQLSGGQKQRVAIARAILKDPKILLLDEATSALDAESERIVQAALDHVM
VGRTTVVVAHRLSTIKGADIIAVLKDGAIAEKGRHEELMDIKDGVYASLVELRSASS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagcggccccggggacggggacggatggcgagacaaagaaggaggaggtcggc
atggatcgcgggaagaaggtgtccttcacggggctgttccggtactccgacggcacggac
ctgctgctaatgctagtcggcacggtggccgcgttggccaacggcatgtcgcagccggtt
atgaccgtcattttcggcgacgtcatcgacgccttcggcggcgccaccaccggcaacgtc
ctcaaccgcgtcaacaaggcggttctaaactttgtttatttgggcatcggaacagccgta
gtctcctttctccaggtggcatgttggacaattacgggcgaaaggcaggcaacgcacatt
cgttctctatacctcaaatctgtcttgagacaggatatatcattctttgacgtagaaatg
acaactgggaagatagtttcaagaatgtctggtgatactgtgctagttcaggatgcaatt
ggtgagaaggttggcaagtttctacaactcattgctagtttcatcggtggtttcgttata
gcttttctcaaaggctggcttctatctgttgtcatgttggcatccatacctccagttgta
attgctgcagcagcagtggcaaaagtgctatctacaatctctagcaaaggccaacaatca
tacggtgatgcagggaatgttgttgaacagacaattggagccataaaaacagttgcctct
ttcaatggggagaagcacgccatcagagcatacaataagctcatacacaaaacatacaag
actactgtgaaggaaggacttgccaatggcactggcatgggttctattttcttgatattt
ttctctagctatggtttagtcatatggtacggtgcaaagttgatacttaacaaaggatac
acgggaggaaaagtcatcactatattgtttgctatcatgactggggcaatgtctttaggc
aatgccaccccgtgtatgacagcctttgcacaaggacaatctgcagcgcatagattgttc
acaacaatcaagaggaaaccagagattgatcctgatgataggactggtaagcagttagaa
gatatcaggggtgatgttgagctgaaggatgtgtattttagctacccagcaagacctgat
caactgatatttgatggattctccttacatgtgtctagtggcactacaatggctatagtt
ggagagagtggaagtggcaagtcaactgtgattagtcttgtagagagattttatgatccg
caggctggtgaggttttgattgatggaatcaatatcaagagtgtacagctcgattcaatt
agagggaaaattggtctggttagccaagagcccttgctttttatgacctcaattaaagat
aatataatgtacggcaaagaagacgcaacatttgaagagattaggagatctgctgagctc
gccaacgcagcaaatttcattgataagcttccaaatggttatgacacactggttggccaa
cgtggtgctcagctttcagggggacaaaagcaaaggattgcaattgcaagagcaatcatt
aaaaacccaaaaatacttttgttagatgaggccactagcgcattggatgtggagtcagaa
aggatagttcaggaggcactgaataggatcatggtcgacagaacgacccttgtggttgca
catcgtctaactactgttaggaatgctgattgcatatcagttgttcaacaaggaaagata
gttgagcaaggtccccatgacgaattggtgctaaacccagatggtccttactctcaactt
attcgacttcaagaaagtcgtgaagaagagcagaaaatagatcgtcgaaggttggatccg
atgtctaaaaatacaagcttatcattgaagcggtcaattagtagaggttctgcagggaat
agtagtgcgcattcttccaccctccctttcatgatgcctgaaaaaaatgatacacatggg
gggaatcagacagagctgcatggtgatggtgagatttcaacgaaagctcctctgggacgg
ctagcacgtcttaacaagccagaggtacctattatcctcttaggatccctagcagcagca
gttcatggagtgcttttcccaatgtttggcgtaatgattgccaatgccatcaaagttttc
tatgcaccaccagataagatgagaaaagattctagtttttgggctttgatgtgtgttgtg
cttggtatcttgtcaataatctcaataccagcagagctcttcttgtttgggatagcagga
gggaagcttatagagcgcatccgttcaatgtcatttcaaagcattgtgcatcaagaagtt
gcttggtttgatgatcccaagaattccagtggagcacttggtgcaagactgtcagttgat
gctttgaatgtacggcggttagttggagataacttggccttaacagttcagattatcgct
acacttatcacaggatttgtcgttgctgtgatggctgactggaagctctctttgatcatc
ctctgtgtcattccattagctggtattcaaggttatgcccaagtgaagttcctgaagggt
ttcagtcaagatgctaagatgatgtatgaagacgcaagccaagtggccactgatgcaatt
agtagtatcaggaccatagcttctttttgttcagagaaaaaaattacaacaatatatgat
cataaatgtgaagcatcaatgagtcaaggagtcagaacaggaatagttgggggcattgga
tttggtttctcattcttgatgttgtaccttacatacggtctttgcttctatgttggagca
caattcgtgcgccatggccaatcagattttggtggtgttttcaaggttttctttgcacta
gttttagcgactattggtgtatctcagtcaagtgcattggccagcgattcatcaaaagca
aaggattcagctatctccatatttgctttactagaccgaaagtctgaaatcgactcaagc
agcaatgagggtttgacaataaacgaggtcaagggcaacattgatttccaacatgtcagc
ttcaagtacccaacacgcccagatattcagatcttcagtgactttaccctgcacattccc
tctggcaagactgttgcactcgttggagagagtggtagtggaaagtcaacagtaatcgga
ctgttggagcgattctacaatcccgattcaggtaccgtttcactggatggagtggaaatc
aagagcttaaacatcaattggttgagggaccaaatggggctggtgagccaggagcctgta
ctcttcaacgacacaatccgcgcgaacatagcctatggtaaggatggggaagtgaccgag
gaggagctcattgcagcagcgaaggcatcaaatgcacatgggttcatatcgagccttccc
gaaggatatgacaccaccgttggggagaggggcatccagctatccggcggccaaaagcag
cgggtggctattgcgagggccatactgaaagacccaaagatactactacttgatgaggcg
acaagcgccttggatgctgagtccgagcggattgtgcaggctgcgttagatcatgtgatg
gttggcaggaccactgttgttgtggcgcaccgcctctcgacgatcaaaggtgctgacata
attgcagttctgaaggatggtgcgatagcggagaaaggaagacacgaggagctgatggat
atcaaagatggagtgtatgcttcgctggtagaacttcgttcagcgtcatcataa
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integrated database retrieval system
