Lolium rigidum (rigid ryegrass): 124667416
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Entry
124667416 CDS
T09103
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124667416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124667416
Membrane trafficking [BR:
lrd04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
124667416
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF16
T2SSF
GIT1_C
Motif
Other DBs
NCBI-GeneID:
124667416
NCBI-ProteinID:
XP_047060657
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Position
6:complement(328382249..328385386)
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AA seq
342 aa
AA seq
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MHPSRSAPASFRDRTNEFRAAVESARRHAAPSPAAASASGGGGGPLDDSLSAASAQSEFK
NRASRIGLGIHQTSQKLARLAKLAKRTSVFDDPTLEIQELTAVVKKDIGALNNAVMDLQV
LCNSQNESGNLSKDTTNHSTTVVDNLKNRLMSATKEFKEVLTMRTENMKVHENRRQMFSS
SAAKDASNPFMRQRPLVAREASDSAPPAPWATDSATTPLFQRKKTNGDHGASSSSTPAFM
QQQQLAVQQDSYMNSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMEDTVA
NVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgtcgcggtccgcgccggcgtccttccgggaccgcaccaacgagttccgcgcc
gccgtcgagagcgcgcgccgccacgccgcgccgtcccccgccgccgcgtccgccagcggc
ggcggcggcgggcccctcgacgactcgctctccgccgcgtccgcgcagtccgagttcaag
aaccgcgcctccaggatcgggctcgggatccaccagacctcccagaagctcgcgcgcctc
gccaaattggcaaagaggacatccgttttcgatgacccaaccttagagatacaagagttg
actgcagttgttaagaaggacatcggtgctttgaataatgctgttatggacctacaagtt
ctctgcaattcacagaatgagagcggtaatctgtccaaggatacaacaaatcattccact
actgttgtggacaacctaaaaaaccgcctgatgagtgcaacgaaagaattcaaagaagtt
cttaccatgcggacagagaacatgaaggttcatgaaaatagaaggcaaatgttctcctcc
tcagcagcgaaggatgcatcgaacccattcatgcgccagcgtcctcttgttgccagggag
gcatctgactctgcgcctccagcaccatgggccactgactctgcgactacgcctttgttt
cagaggaagaagaccaatggagatcatggagcgtcatcatcatcgactccagctttcatg
cagcagcagcagttggcagtacagcaggacagttacatgaatagcagagctgaggctctt
caaaatgtggaatcaaccatacatgagctgagcaacatcttcacacagctagcaaccatg
gtgtctcagcagggagagctagcaatcagaatcgacgagaacatggaggacactgtggcg
aacgtggagggagcgcagggccagctcctgaagtacctgaacagcatctcgtccaacagg
tggctgatgatgaagatattcttcgtcctgatggtgttcctcatgatcttcatattcttc
gtcgcctga
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