Lolium rigidum (rigid ryegrass): 124667512
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Entry
124667512 CDS
T09103
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124667512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124667512
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124667512
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124667512
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF6011
zf-C3HC4_3
F54D1_6_C
Motif
Other DBs
NCBI-GeneID:
124667512
NCBI-ProteinID:
XP_047060738
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All DBs
Position
6:301409071..301410739
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AA seq
292 aa
AA seq
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MGAGLRIERDSGPSAKKRREGEICGGDRDEEEEDDEGEYEQMVSVGSNCGIIALEALDCT
VCNHPLRPPILQCATGHVICMSCHRKLRNKDRCYVCSITGGYQRCIVLEKILESVQIPCS
NTMYGCTVKTHYLEGADHDKSCPCAPCFCPDPSCHFTGSTAELLDHLTHTDNWPATEFEY
GQRFDLQIQEGMHVLYTREDGTLLLVKFTPVPPFGNAVSIMCVDPHAVAGDRKFRCLVGS
NCSTDSWHSDFRTISTNLSNDLPTEDGSYSLVVPTLSCYSGINVTISKVTVL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggggctggattgaggatcgagagggacagcgggccgagcgccaagaagaggagagaa
ggggagatctgcggcggcgaccgcgacgaggaggaggaggacgacgagggcgagtacgag
cagatggtttccgttggcagcaactgcggcatcatcgctttggaggcgctggactgcacc
gtctgcaaccaccccctccggccaccaatcttgcagtgcgccactgggcatgtgatttgt
atgtcctgccatcgcaagctccggaacaaggacaggtgctacgtgtgctccattactggc
ggctatcaacgctgcatcgtgctcgagaaaatcctggagtctgtccagatcccttgctcc
aataccatgtacggttgcaccgtcaagacacattacctcgagggagcagatcatgacaag
tcgtgcccatgtgcaccgtgcttctgccctgatcctagttgtcactttactggctcaacc
gcagagctccttgaccatctcacccatacggacaactggccggcaactgagttcgagtac
ggacagcgttttgacctgcagatccaggaaggaatgcacgttctctacacaagggaggat
ggcaccctgttgctggtaaaattcacgccggtgccgcctttcggcaatgctgtctccatc
atgtgtgttgatcctcatgccgtggcgggggaccgcaagttcaggtgcctggttggttcc
aactgcagcaccgatagttggcattcagatttccgtaccataagcaccaatctgtccaac
gacttaccgacggaggatggcagctactcattggttgtgccgactctttcttgttacagc
ggcatcaatgtcactatctcaaaggttacggtgctgtag
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