Lolium rigidum (rigid ryegrass): 124667798
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Entry
124667798 CDS
T09103
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124667798
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124667798
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124667798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_16
TIP49
AAA_14
AAA_5
AAA_24
Mg_chelatase
AAA_2
NPHP3_N
AAA_28
AAA_33
nSTAND_NTPase5
Vps4_C
nSTAND3
ORC-CDC6-like
NACHT
IstB_IS21
RNA_helicase
AAA_7
AAA_25
AAA_18
Parvo_NS1
AAA_17
ABC_tran
DUF815
bpMoxR
PhoH
TsaE
NB-ARC
AAA_19
Motif
Other DBs
NCBI-GeneID:
124667798
NCBI-ProteinID:
XP_047060996
LinkDB
All DBs
Position
6:143162517..143168508
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AA seq
407 aa
AA seq
DB search
MAMAAADDDEPSITRWSFEDFERYYDAGLGIRHQPKGDGDDDDDDEAPAPALGSGPADSA
RANGGADLAVFEQYERLDRNVEFRNGAMEAGPPQKSLLPSFESAETRNLAETLLRDIIRG
SPDVKWESIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAV
ATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARS
EHEASRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEAR
HAMFEEFLPSTPDAMEVPYDILVENTEGYSGSDIRLVCKEAAMQPLRRIMAALEGIQEEV
HEDDLPEVGPVTAEDIELALRNTRPSAHLHAHKYEKFNQDYGSHVLS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccgccgccgacgacgacgagccctccattacccgctggtccttcgaggat
ttcgagcgctactacgacgcgggcctcggcatccgccaccagcccaagggcgacggtgac
gacgatgacgacgacgaggcgccggcgccggcgctcggatcaggccccgccgacagcgcc
cgcgccaacggcggcgctgacctcgccgtgttcgagcagtacgagcgtctggatagaaat
gtcgagttccgtaacggggcaatggaggctgggccgccgcagaaatctctgctcccttct
tttgaatctgcagaaacacgcaacttagccgagacattgttgagggatatcattcgtggg
agtccagatgttaaatgggaaagcatcaaaggtttggaaaccgcgaagcgtcttcttaaa
gaagcagttgtcatgcctataaagtatcccaaatacttcactggtctattatctccttgg
aaaggcatattgctttttggtccaccgggaacaggaaagacaatgctggcaaaagctgtg
gctactgagtgcaaaacaacctttttcaatatttcagcttcatcaattgttagcaaatgg
cgtggtgactcggagaaactcgtaaaagtattatttgagcttgcgcggcatcatgcacca
tctaccatttttcttgatgagattgatgctattattagccaacgtggcgaagctcgtagc
gaacatgaagccagtcggcgattaaagactgaactattaatacagatggatggactgact
aagacagatgagcttgtttttgttcttgcggccacaaatttaccatgggaactggatgca
gcaatgttacgccgattggaaaaacgtattcttgtgcccttaccagagccagaagctaga
catgctatgtttgaagagttcctaccttctactcctgatgcaatggaggttccgtatgat
attcttgtggagaacactgaaggatattcgggctctgatatacgccttgtgtgcaaggag
gctgcaatgcaaccccttagacggataatggcagctctagaaggcatccaagaagaagtg
catgaggatgatttgcctgaagttggtccagtaacggcagaggatattgaacttgctttg
aggaatacacggccgtctgctcatctccatgcacataaatacgaaaaattcaatcaagat
tatggcagccatgtcctcagctaa
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