Lolium rigidum (rigid ryegrass): 124667910
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Entry
124667910 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124667910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124667910
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124667910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
SGT1
COG3_N
Motif
Other DBs
NCBI-GeneID:
124667910
NCBI-ProteinID:
XP_047061098
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Position
6:75680635..75690230
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AA seq
728 aa
AA seq
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MATSFAFGNSGAAGSTSPSPFSFSTAPSAFSSSPAPAFGSSPAPAFGSSAFPSAAASTPA
FGSSLFGASPASASAPAAASSPSPFGFGATGFGAAQPPSSSASPLFGVAATSAAATTPTM
FGTTTTTPSIFGAPATSSAATTPSIFGAPATSSAATTPGLFGAPATSSAASTPSLFGAAS
TPATTPGIFGATTAAATTPSLFGAVSSAASTPGFGFGSSASGATTAPTPSFGFNSAPAAS
STAATSASTPALGFGAATGSTLFGSTSPAPLFGTTAASSPATTAPSLGFSLSPATTASAP
SFGFAPSSGSTTSSLFSSAPSASAFSFSNSAPAASSTPASGFSLATSQAASAPSMFSSTG
AAASSSASSLFGASFAAPTPTFASVSATTASTVPSATATPATAGSLFSAPPSSSLGFSFT
VPPSASSSAAVTATITSSSTSAAVTTTTPSTTTSAFPSFSLQPTTQASASTSVAPSTLFG
STTPTSTSAITTTTQATSSAVQASTTGSTTNAITPAASQAPKLPSEIVGKCVEEIIRDWN
NGLQDRTAKFRKHATAISEWDRRILQNRNVLIRLEADVAKVVETQTSLERQLELIETHQK
EVDKALQSMEEEAERIFQDERVLLREDEAASARDTMYEQGEVVENELQHMTEQVKSIIQT
MNATQGGELEAADSMAPFDVAVRILDNQLRSLMWIDEKANEFSNRIQRLPNNSTVAERDS
GIPRFWLS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttcgcgttcggcaactccggcgcggcgggatccacctcgccctcgccc
ttctccttctccaccgccccatccgccttctcctcctccccggcacccgcgttcggctcc
tccccggcacccgccttcggctcctccgccttcccttccgccgccgcctctactcccgct
ttcggttcgtccctcttcggagcctcccctgcctccgcatccgctcccgccgccgcttcc
tccccgtcccctttcggcttcggggccactggttttggggccgctcagccgccttcctcg
tccgcctcgcccctcttcggagtagccgccacctccgccgcggcaaccacacccaccatg
ttcggcaccaccaccaccacccccagcatcttcggcgcaccagccacctcatctgcggcc
actaccccgagcatcttcggcgcaccagccacctcatctgcggccactaccccgggcctc
ttcggcgcaccagccacctcatctgcggccagcaccccgagcctcttcggcgccgcatcc
acccccgcgaccactccaggtatcttcggcgcgaccaccgccgccgccaccacccccagc
ctcttcggcgccgtctcttccgccgcgtccacgccgggcttcggctttggctcatccgcg
tcaggcgccaccactgccccaacaccgtcattcggcttcaacagcgcgcccgccgcatct
agtaccgccgctacctcagcttccacaccggctctagggtttggggccgccactggctcg
accttgtttggatccacctcgcctgcgcctctattcggcaccaccgccgcctcgtctcca
gctacgaccgcgccatcccttggtttttcattatccccagcaactactgcctcagccccc
tcgttcggcttcgcaccatcgtcaggaagcaccacatcttccctgttctcgtctgctccc
tcagcctccgccttctcgttctctaacagtgctcccgccgcttcatccacgccggccagt
ggtttctccttggccacttcgcaggctgcgtctgctccctcgatgttctcaagcacaggt
gcagcagcaagctcgtcagcgagctccctttttggtgcatcttttgctgctcctacaccg
acatttgcctctgtttctgcaacgactgcatccactgtgccatcagctactgctactcct
gcaacagcggggtcattgttctcggcaccaccttcttcctctcttggcttcagctttaca
gtaccgccatcagcttcatcatcagcagcagttacagccaccattacaagttcctcaaca
tctgcagccgtgacaaccaccaccccttcaactacgacgagcgcgtttcctagttttagc
ctgcaaccaactactcaagcttctgcctcaacgtcggtggctccgtcaacactgtttggt
tctactacacccacaagcacgtcagccatcacgaccacaactcaggcgacttcatcagct
gttcaagctagcaccactggatctactactaatgctattactccagcagcatcccaagca
ccaaagctcccatcagaaattgttggtaaatgtgttgaggagattattagggactggaac
aatgggcttcaagaccgtactgctaagttccggaagcatgccactgccatatctgagtgg
gacaggagaattctgcaaaataggaatgttcttataaggcttgaggctgatgttgctaaa
gttgttgaaacacaaacaagcttggagaggcaacttgagttgatagaaactcatcagaaa
gaggtggacaaggctctacagagcatggaggaggaagctgaacggatattccaggatgag
cgtgtcttacttcgtgaagatgaggctgcctctgcaagagatacaatgtatgagcaaggt
gaagtcgtagagaatgaattgcaacatatgacagaacaagtaaaatccatcattcagacc
atgaatgctactcagggtggtgagctagaggcagcggatagcatggcgccattcgatgtt
gctgttcggatactggataatcaactgcgctctctaatgtggattgatgagaaggcgaat
gagttctcaaacaggatacagagactgcccaacaatagtactgtggctgagcgcgactca
ggaattccaaggttttggttaagctga
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