KEGG   Lolium rigidum (rigid ryegrass): 124668008
Entry
124668008         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124668008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124668008
Enzymes [BR:lrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124668008
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124668008
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 124668008
NCBI-ProteinID: XP_047061171
LinkDB
Position
6:complement(341612312..341636999)
AA seq 1269 aa
MMALRIAILDMVLASSARVMEDPPRDSGQSTNGPEPELESMILDDTGGSRSHTMDDSNGQ
SSMDVDRDLSFMDVDANGRSSLDDDSKGKYSSESHPEVPIDMSLGSLEEFCKEASRSFFD
EIGLISHQLNSYNQFVSHGLQELFHSLGEITVEPDYDPSRKGPGGWRHAIIKFGKVELHK
PVFWSEKTDFAEESLVLEPRHARLQNMTYSSKMEVEVNIKVYSMEKSDKAKTGNDLSVHS
RVLIMNETTAMNIGRLPVMVNSNLCWLHKDKKSEHKDKKSGHADKAIDCLYDSGGYFLIK
GMEKVFIAQEQKCLTRIWVADRPYWTVSYLSEIRKRRIYITLIDSTKNNDTSGSKIISFS
FLYANMPIWLMFFALGVSSDKEAFDMIDMGDCDASVMNAISATISESGELCEGFRKSDKA
RQYVDDLVKSQKFPPAESFDDYVAKNLFPGISGNRNKAYFLGYMVKCLLMAFTGKRKCDN
KDDFRNKRLELPGELLGRELRAHLRHAERLMVKALQRDLNSDRDLEFPLRYLDASVITNG
INRAFATGSWCHPFKRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNP
SYWGKMCFMSTPDGENCGLVKNLAVTAIVSCRVAQPLIDRFMSCGMNKLDEIHVEEIPKM
VKIFLNGDWVGSCTDPASFVMRLRCMRRGGLIDPQVEIKRDKHQLPGEVRVFSDAGRILR
PLLVVENLNKITKRKGCPYSFQTLVQQEIIEFIGVEEEEDIQCAWGIRHLFPSSGQEVPG
YTHCELNGSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPRTRVDTLSHQL
YYPQKPLFKTVTADCIGRSDYPFGRKDGFSRPEYFNGQNAIVAVNVHQGFNQEDSLVINR
ASLERGMFRTELIRSYKAEVETKEPIKRLKMKEKVNFGKMESKRGRVDNLDDDGLPYVGA
SLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVSLRQVRSPCVGD
KFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALG
GKIRYATPFTTASLEVISEQLHKAGFQRWGAEGVLNGQSGERMKSLIFMGPNFYQRLTHM
SEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFS
EMHVCQTCERAANVIIRPVQGGKKIRGPYCGFCRSSENIVRIAVPYGAKLLYQELFSMGI
CLKFKTEVC
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgatggcattgcgaatcgcgatacttgacatggtattagcgtcctctgctcgtgtaatg
gaagatccaccaagggacagtgggcaatcaacaaatggccctgagcctgagctggaatct
atgatactggatgacactggagggagcagatcccataccatggatgattcgaacgggcag
tcttctatggatgttgacagagatctgtcttttatggatgtggatgcgaatgggagatca
tccctggatgatgatagtaaagggaagtactcttctgagtcacatccagaagttcccatt
gacatgagcttgggaagtctagaggagttctgcaaggaagcctcaaggtcattttttgac
gagattggtctgattagccatcagttgaattcctacaaccaatttgtctcgcatgggctc
caggagctttttcattcgctaggggaaattaccgttgagccggattatgatccttcaagg
aaaggaccaggtggttggaggcatgccatcatcaagtttgggaaagtggaactacataag
cccgtattttggtctgaaaaaactgattttgctgaggagtcactcgtcctcgagccgaga
catgctcgcctccaaaatatgacatattcttccaaaatggaggtagaagtgaatatcaag
gtttattctatggagaaaagtgacaaggctaaaacagggaatgatctttctgttcacagc
agagttcttatcatgaacgaaactacagcaatgaatattggccgccttccagttatggtt
aattcaaacttatgctggctgcataaagataagaaaagtgagcataaagataagaaaagt
gggcatgcagataaggcaattgactgcctttatgattctggtggatattttttgatcaag
ggaatggagaaggtattcatcgcgcaagagcaaaaatgcttgaccaggatttgggttgct
gaccggccttattggactgtctcttatttgtctgaaatcagaaaaagaagaatatatatc
acactaattgattctacaaagaataatgataccagtgggagcaaaatcatttccttctcc
tttttgtatgccaatatgcctatttggctaatgttttttgcgctaggcgtatcatctgac
aaggaagcatttgatatgatagacatgggagactgtgatgcttctgtcatgaacgcgata
tctgcaactattagtgaatcaggtgaactgtgtgaaggctttcgcaagtccgataaagcc
cgccagtatgtggatgatttggtcaagagtcaaaaatttcctccagcagagtcgtttgat
gattatgttgctaagaatctgtttcctggtataagtgggaataggaataaagcatatttc
ttaggttacatggtcaaatgccttctaatggcttttactgggaagcgcaaatgtgataat
aaggatgatttcaggaacaaaaggttggagctacctggtgaattgcttggaagagaactt
cgtgcgcatcttaggcatgcagagagactcatggttaaggccttgcagagagatttgaat
agtgaccgcgatttagagtttcctctgcgctaccttgatgcttcagttattactaatggt
ataaatcgtgcctttgctactggttcttggtgccaccccttcaaaagaaatgaaagatgc
tcaggaattgttgcaacgctaaggagaacaaatcctcttcaaatgatgtcagacttgagg
aaaagtcgccagcaggttgcttatgctgggaaagctggtgatgcaagatatcccaatccg
tcctactggggaaagatgtgttttatgtccactcctgatggtgaaaactgtgggcttgtg
aaaaatctagctgtgactgctattgttagctgtagagtggcacagccattgattgacaga
tttatgtcttgtggaatgaataaactggatgaaattcatgtcgaggagattcctaaaatg
gttaagatctttctcaatggcgattgggtaggatcctgtactgatccagcttcatttgtc
atgcgtttaaggtgtatgagacgcggtggtctgatcgatccacaggttgaaatcaaaagg
gacaagcaccaacttcctggagaagtacgggtgttctctgatgcagggcgaatcctcaga
cctcttcttgtggttgagaacctaaataaaattacaaaacggaagggctgtccttactct
tttcagacactagtgcaacaagaaataattgagttcattggtgttgaagaggaggaagat
atacaatgtgcatggggaattaggcacctatttccgagcagtgggcaggaggttcctggt
tatactcactgcgagctgaatggatcttttctgttgggattaagttgtggtcttatccct
tttgcaaatcacaattttgctcgaagggtgctgtaccagtcggaaaaacactcacagcaa
gctattggatactccacaacaaatccacgtaccagagttgatactctttcccatcaactt
tactaccctcagaaaccccttttcaaaacagttacagctgattgtattgggagatcagat
tatccttttggaagaaaagatggattttctaggccagagtatttcaatggacaaaatgcg
atagtggcagtcaatgttcatcagggattcaaccaagaggattccctggttataaatagg
gcttctcttgaacggggcatgttcagaactgagctcatacggagctataaggcagaagta
gagaccaaagagcccatcaaacggctgaaaatgaaggaaaaggtgaactttggtaaaatg
gaaagcaagagagggcgagttgacaatcttgatgacgatggattaccatacgtgggtgca
agtctccagagtggagacattgtcattgggaaagtgtcagaatctggtgaagaccatagt
attaaactgaagcatacagaaaagggaatggtccagagagtgttgctctcagccaatgac
gaggggaagaattttgctgttgtgtctttaagacaggttcgatctccttgcgtcggagat
aaattttctagcatgcacggacagaaaggtgttgttggttttctagaatctcaggagaac
ttcccttttacttgccaaggaatagttccggatattgtgataaatccacatgcctttcct
acccgtcaaactccaggccagctgcttgaagctgctttggggaagggaatcgctcttggt
ggtaaaattagatatgcaacgccattcacaacagcatcacttgaagtgatctcggaacaa
ttgcacaaggctggatttcaaagatggggagctgaaggtgttctcaacggccaaagtggt
gaaagaatgaaatccctgattttcatgggacctaacttctaccagaggctgacacacatg
tccgaagacaaggtgaaattccggaacacggggccagtgcaccccctcacaaggcaacct
gtcgcagacagaaagaggtttggaggtgtgaagttcggcgagatggagcgcgactgcctc
cttgcccacggagcagctgccaacctccacgagcggctcttcatgcttagcgacttctca
gagatgcatgtgtgtcagacgtgtgaacgggcggcgaacgtcatcataaggcccgtccaa
ggagggaagaagatccgaggtccttactgtgggttctgccggtcttcggagaacatagtc
aggattgcagtcccctacggcgcgaagctgctctaccaggaactcttcagtatggggatc
tgcctcaagttcaagacggaagtctgctag

DBGET integrated database retrieval system