| Entry |
|
|---|
| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
|
|---|
| KO |
|
|---|
| Organism |
lrd Lolium rigidum (rigid ryegrass)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lrd00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124668072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lrd03019]
124668072
03012 Translation factors [BR:lrd03012]
124668072
Enzymes [BR:lrd01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124668072
Messenger RNA biogenesis [BR:lrd03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124668072
Translation factors [BR:lrd03012]
Eukaryotic type
Initiation factors
Initiation associated factors
124668072
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
6:102632987..102641974
|
|---|
| AA seq |
1145 aa
MMRFRAVLREFRASDEEVYTFEPSLSKAERAAIHQMCRKMGMNTKSSGNENVRCLSVYRR
NNKKDTQGPAEGPSRLGFSKEATQVLLDLFTHYPPDEAELNGDAVKKSGKKAARIPWKRD
GAFCRPTMSGRDIAKKVEMLTSNTSGQLRKIAEDRSKLPISSFKDHICSTLEKHQVVLIS
GETGCGKTTQVPQYILDYVWGKGESCKIICTQPRRISATSVAERISAERGEAVGNTVGYK
IRLESKGGKNSSIMFCTNGVLLRLLIGRVTNIQTAQNVTHSFDDPIMEITHIIVDEIHER
DRYSDFMLAILRDLLPMYPHLHIVLMSATINADRFSQYFNGCPVIEVPGHTYPVKTFYLE
DVLSILQSVDDNHLHPASDDLELKTVLTDEYKSSLDEVISMALVNDEFDPLIELISVEQN
PEVFNYSHSETGVTPLMVFAGKGQLGDVCMLLSFGVDCSARDHDGKSALDWSQQENQKEV
YEVIKKHMDCTPAKSPEENDLLNKYLATISPEHIDTVLIERLLKKLCADSSEGAVLIFLP
GWEAINKTRERLLASSIFQDSSKFHVLSLHSMIPSSEQRKVFQRPPAGVRKIILSTNIAE
TAVTIDDVVFVIDSGRMKEKSYDPYNSVSTLQTSWVSRASARQREGRAGRCQPGTCYHLY
SRLRAASLQEYQTPEINRMPIEELCLQVKLLDPKCRIADFLKKTLDPPVAETVKNAITVL
QDLGALTQDEQLTDLGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACAVDYRDPFVLP
VDPNQRKRADAAKIELASLYGGFSDQLAVVAAFDCWRCAKDTRQKALFCSQYFVSSTTMT
MLSSMRKQLQNELAQRGFLPAEASACNINAKAPGIISAVLMAGAYPMVGKLLPPCKNARS
TVVETASGAKVRLHPSSANYNLSLNNSSGYPLVIYDEITRGDGGSMSIKKCSVVGSYPLL
LLASEMAVAPPDGDNHEEEGSSGDEVIMSSPDNTVSVVVDRWLRFHATALDVAQMYCLRE
RLVSAILFKVQHPQHVLPPALGATMYAIACILTYDGLPAMVQCNTGAFDSRPAERRGGGY
IRPNDFLMSLLTDRVAPLAEYLSPENILPPSAGGRYSLPSKTVPGPSAPQSSKRQRASAR
RPRPQ |
|---|
| NT seq |
3438 nt +upstreamnt +downstreamnt
atgatgcgcttcagggcagtgctcagggagttccgggcctccgacgaagaggtgtacaca
ttcgaacctagtctatccaaggcagagcgtgccgcaatccatcaaatgtgtagaaagatg
ggcatgaatacgaaaagttccgggaatgagaatgtccgatgccttagtgtttacagacgt
aacaataagaaagacacacaggggcctgcagaaggccctagcagacttggattttctaaa
gaagcaacacaggttttgctagatttatttacgcattaccctcctgatgaagctgaatta
aatggtgatgctgtcaagaaatctggcaagaaggctgcaagaattccatggaaaagagat
ggtgccttttgcaggccaactatgagcggacgtgatatagcaaagaaggttgagatgctt
acatctaacacaagtggacagctgaggaagatcgctgaagacagatccaaacttccgata
tcatccttcaaggatcacatttgttctactctggaaaaacaccaggtggttcttatttct
ggagaaacaggctgcggtaaaactacccaggttcctcaatatatcttggattatgtgtgg
ggcaagggtgaatcatgtaagatcatatgtactcagccgcgacggatatcagctacttca
gttgccgaacgaatatctgctgaaagaggagaggctgttggtaacacagttgggtacaag
atacgtttggagtcaaaaggagggaagaattcgtcaatcatgttctgtactaatggtgtt
cttttgaggctgttgataggcagagtaactaacattcaaacagcacaaaatgtgacacac
tcatttgatgatccaattatggagataacacacatcattgtggatgaaatccatgaaagg
gataggtattccgatttcatgttagctatcttgagagatttgctaccgatgtatccgcat
cttcatatagtgctcatgagtgcaacaatcaacgctgaccgtttttctcagtatttcaac
ggatgcccggttattgaagtccctggccatacctaccctgttaaaactttctatttggag
gatgtgctttctattctgcaatctgtagatgataatcatcttcatcccgcatcagatgat
ctggagctgaagactgtgttaaccgatgagtacaaaagctcactggatgaagtaattagt
atggctttggtcaatgatgaatttgatcctctcattgagcttatttctgtagagcagaac
ccagaagtcttcaactactcacattcagaaactggtgtgacacctttgatggtttttgct
ggaaaaggtcaacttggggatgtctgcatgcttctatcatttggtgtggattgttctgca
cgtgatcacgatggaaaatctgcattagattggtctcagcaagagaatcagaaagaggtt
tatgaagtaataaaaaaacacatggattgtactccagcaaaatcacctgaagagaatgat
cttcttaataaatacttagcaactatcagtccagagcacatagatactgtgctgatagaa
cgcttgcttaaaaagttatgtgctgattcaagtgaaggagctgtattgatcttccttcct
ggttgggaagctataaataaaacaagagagaggttacttgcttcttccatctttcaggat
tcatcaaaattccatgtgctgtctctccattccatgatcccatcttcagagcagagaaag
gttttccaacgtccacctgctggggttcgtaaaattattctctcaacgaacatagcggag
actgcagtaacaattgatgatgttgtatttgtcatagatagtggaagaatgaaagagaaa
agttatgatccatataatagtgtgtccacgcttcaaacttcctgggtttctcgagctagt
gcaaggcagcgtgaagggcgtgctggtcgttgtcagccaggaacttgctaccatctttac
tctagattgcgagcagcttcactgcaagaataccaaactcctgaaattaataggatgcca
attgaagaactatgtttgcaggtcaaactgcttgatccaaagtgcagaatagcagacttt
ctaaagaagaccttggatcctccagttgctgagactgtaaaaaatgctataactgtgctt
caggatcttggtgctttaacacaagatgaacagttgacagatttgggtgagaagttaggt
tctcttccggtccatccatccacaagcaagatgctcctgtttggtatattgatgaactgc
cttgatcctgcattgacattggcatgtgcagtagattatagagatcctttcgtccttcca
gtcgatccaaatcagagaaaaagagccgatgcagccaaaatcgagcttgcttcattatat
ggtggatttagcgaccagcttgctgttgtggcagcatttgattgttggagatgtgctaaa
gacacgcgccaaaaagctttgttttgttcacaatattttgtcagttcaaccaccatgact
atgttgtcaagtatgcgaaaacagcttcagaatgaactagctcaaagaggatttcttcct
gctgaagcatctgcctgcaatataaatgctaaagctccaggtatcattagcgcagtcctt
atggctggcgcttaccccatggttggaaagctgcttcctccttgcaaaaatgccaggagt
acagttgtggaaacagcaagtggtgccaaagttcgattgcatccgtcttctgcaaactat
aacttgtcattaaataattcttctggatatccgctagtcatatatgatgaaattactcga
ggtgatggtgggtcgatgtctataaagaaatgttctgttgttgggtcatatccactactt
ctgcttgcttccgaaatggctgttgctccacctgatggtgataatcatgaagaggaaggt
tccagtggggatgaagtgattatgtcttctcctgataacactgtttcagttgttgttgac
cggtggctcagatttcatgcgacagctcttgatgttgctcaaatgtactgcctaagagaa
cgtctagtatctgctatacttttcaaagtccaacacccgcagcatgttctcccacctgct
cttggagcaacgatgtatgccattgcatgtatcttgacatatgatggcttgcctgctatg
gttcaatgtaacactggtgcttttgattcgaggccagcagaaaggagaggtggtggttat
attcgacctaatgatttccttatgtcattgctaacggacagagtcgcaccacttgccgag
tatctttctccggagaatattctgcccccgagtgctggtggtagatatagtctacccagc
aaaactgtaccagggccttcagcaccacaatcttccaaaaggcagcgtgccagtgctcgg
cgcccgaggcctcaatag |
|---|
