KEGG   Lolium rigidum (rigid ryegrass): 124668195
Entry
124668195         CDS       T09103                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd00040  Pentose and glucuronate interconversions
lrd01100  Metabolic pathways
Module
lrd_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    124668195
Enzymes [BR:lrd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     124668195
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 124668195
NCBI-ProteinID: XP_047061322
LinkDB
Position
6:complement(53168952..53172091)
AA seq 401 aa
MAMTKPMLSLLAHLHAALLLLSGAGAAVYDVTRYGARPDGVTDSTLPFLRAWADACRSPR
QATVLVPPGMFLLGSATFTGPCATHAVTFSIAGTLVAPTGYGWDATTGRWITFESVEGLT
VSGGVLDGRGSSLWSCKRQQQQQPHVHCPTGASSLTISNSRDVVVDGTRSTNSELFHMVV
LQSHGVTLQQVSVDAPEDSPNTDGIHIHMSSNVAVSNADIRTGDDCVSIGPGNSNLWIER
VSCGPGHGISIGSLGQQQGMAVEVVRNVTVKTTWFTGTTNGFRIKTWGTSKRGLVSGITF
VDSTMIGVHNPIIIDQNYCPGKKSCSDRSSGIKISQVRYIDIRGWSMTPVAVTFNCSRSN
PCSGISLQNVRLMYEGMRLAKSSCRNVNGRTTGLVVPPSCL
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcaatgacgaagccgatgctgagcctgctggcgcacctccacgccgcgctcctgctc
ctctccggcgccggcgcggcggtgtacgacgtgacgcgctacggcgcccgccccgacggt
gtgacggactcgacgctgccgttcctccgcgcgtgggccgacgcgtgccgctcgccgcgc
caggcgacggtgctcgtgccgccgggcatgttcctgctggggagcgccacgttcaccggc
ccgtgcgccacccacgccgtcaccttctccatcgccggcacgctggtcgcgcccactggc
tacggctgggacgcgaccaccggccgctggatcaccttcgagtccgtggagggcctcacc
gtctccggcggcgtcctcgacggccgcggctcctccctctggtcctgcaagcggcagcag
cagcagcagccgcacgtccactgcccgaccggcgcctcgtctctgacgatctcgaactcg
agagacgtggtggtggacgggacgaggtcgaccaacagcgagctgttccacatggtggtg
ctgcagagccacggcgtgacgctgcagcaggtcagcgtggacgcgccggaggacagcccc
aacacggacgggatacacatccacatgtccagcaacgtggccgtctccaacgccgacatc
cgcaccggggacgactgcgtttccatcggcccgggaaactctaacctctggattgagcgt
gtctcgtgtggtccaggtcatggcataagcattggaagtttgggccagcaacaagggatg
gctgtggaggtggtgcgaaacgtgaccgtgaaaacaacatggttcaccggcacaacaaat
ggtttcaggatcaagacatgggggacctccaagcgaggcctcgttagtggtatcaccttc
gtggactccaccatgatcggcgtccacaaccctataatcatcgatcaaaattactgccct
ggaaagaaatcgtgctcagatcggagttcgggtatcaagatcagccaggtgaggtacatc
gacattcgtgggtggtcgatgacgccggttgccgtgaccttcaactgcagcaggagcaac
ccgtgcagtggaattagcttgcagaatgtgaggctcatgtatgagggcatgcgtcttgca
aaatcatcctgccggaacgtcaatgggagaacgactgggctagtcgtgcccccaagctgc
ctctga

DBGET integrated database retrieval system