Lolium rigidum (rigid ryegrass): 124668580
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Entry
124668580 CDS
T09103
Name
(RefSeq) alpha-amylase 3, chloroplastic-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124668580
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
124668580
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
124668580
NCBI-ProteinID:
XP_047061645
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Position
6:91123201..91132963
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AA seq
872 aa
AA seq
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MSAASWSIPAIPRAVPPARGGPHAPGEAFLVAARPRCRAAPRRLRLGRGAGGVVVARAGA
AEVPVAGSGEAAVVFSDKFPLRRRKTVEGKAWVRVDAEPDGDGKCKIVVGCDLEGKWVLH
WGVSYDGETGREWDQPPEEIRPPGSVPIKDSAVETPLEISHSSEGCVLHEVEIKFDKDTP
IDVINFVLKEEGTGAWFQHKGGDFRIPLSGSLKDKDSSGAKQGDKLEGSNAQPKETVPED
KGPNRKFISQFYGEYPILKSEYVENSVSVTVTENSETNKSRVEFDTDITGDVIIHWGVCK
GNTMTWEIPPEPHPPKTKIFRQKALQTLLEQKTDGSGNTISFLLNADYSGLVFILKLNED
TWLRNLESNFDFYIPLTRVDQIGSTQEPRKADEHKLDDKSSQTDGLISDIRNLVVGLSSR
RGQRTKNKVLQEDILQEIERLAAEAYSIFRSPTIEIAEDSVYIDDPESVKPACSGTGSGF
EILCQGFNWESHKSGKWYVELGTKAKELASLGFTIVWSPPPTDSVSPEGYMPRDLYNLNC
RYGTMEELKQLVNIFHQNGMKVLGDAVLNHRCAQFQNQNGVWNIFGGRINWDDRAVVADD
PHFQGRGNKSSGDNFHAAPNIDHSQDFVRNDLKEWLRWMRKEVGYDGWRLDFVRGFWGGY
VKDYMEATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI
LHMALERSEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYAY
ILTHPGTPAVFYDHIFSHLQQDIARLISVRRRLKIQCRSKIKILKAEQNLYAAQIDETVT
MKIGSGHFEPSGPINWTVAVEGHDYKIWEAPS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggctagctggagcattccggcgatcccgcgggccgtcccgccggcgcggggc
ggcccgcacgcgcccggggaggccttcctcgtggccgcacggccgcggtgccgcgccgcg
cccaggaggctgaggctcggccgaggagctggcggcgtcgtcgtggcccgcgccggcgcg
gccgaggtgcccgtcgccggctccggagaggccgccgtcgtcttctccgacaagttcccc
ctgcgccgacgcaaaaccgtggaagggaaggcgtgggtcagggtggatgcggagccggat
ggggacggcaagtgcaagatcgtcgtcggctgcgatttggaggggaagtgggtgctgcac
tggggcgtctcctacgatggtgagactggcagagaatgggaccaacctcctgaagaaatc
aggcctcctggttcagttccaatcaaggactctgcagtcgaaacaccactggagatttca
cacagttcagaagggtgtgtgcttcatgaagtggaaatcaaattcgataaggacactcca
attgacgttatcaattttgttctaaaggaagagggaacaggtgcatggtttcaacataag
ggaggagatttcagaataccattaagtgggtccctcaaggataaagattcatcaggagca
aaacaaggagataaacttgaagggtcaaatgctcagccaaaagaaactgtacctgaggat
aaaggtccaaacagaaagtttatttcacagttctatggtgaatatccgatattaaaatca
gagtatgttgagaactctgtatctgttactgtgacggaaaacagcgagacaaataaaagt
cgcgtggaattcgatactgacattactggagatgttatcattcattggggagtttgcaaa
ggcaataccatgacttgggagatcccaccagaaccacatccaccaaaaacgaagatcttc
cgacagaaagctctgcagaccttgctagagcaaaaaactgatggatcaggcaacactata
tcattcttactgaatgctgattactcgggtcttgttttcattctcaaacttaatgaggat
acttggttgagaaatctggaaagcaactttgatttctatattcctcttacgagagtggac
caaattggaagcactcaagagcctcgtaaggctgatgaacataagcttgatgataagtct
tcgcaaaccgatggcctgatcagtgatataagaaatctggtagttggcctatcatctaga
agaggtcaacgaacaaagaataaagttctgcaagaagatatccttcaagaaatcgagagg
ttagcagctgaagcgtatagcatttttaggagccccactattgagattgcagaggactct
gtttacattgatgacccagaaagcgtgaaaccagcttgttctggcactggatctggattt
gaaatattatgccaaggatttaactgggagtcacataagtcaggaaaatggtatgttgaa
cttggtacgaaagccaaggagttggcatcactaggttttacaattgtatggtcaccacca
cctactgattctgtatcacctgaaggatacatgccaagggatttatacaacctaaattgc
agatatggaaccatggaagagttgaagcagcttgtgaatatttttcatcaaaatggcatg
aaggttctcggtgatgctgtcctaaatcacaggtgtgctcagtttcagaatcaaaatggt
gtctggaatatttttggtgggcgtattaactgggatgaccgagcggttgttgctgatgat
ccacatttccagggaagaggaaacaagagcagtggagataacttccatgctgcaccaaac
attgatcactcgcaagattttgtgagaaatgatcttaaagaatggcttcgctggatgaga
aaggaagttggatacgatggatggagacttgactttgttcgtggcttttggggtggatat
gtcaaagactacatggaagcaactgaaccatactttgcagtaggagagtactgggactct
ctcagttatacttatggtgaaatggattataatcaagatgctcacaggcagagaattgtt
gactggataaatgctacaaatggaactgctggtgcatttgatgtcaccactaaaggaata
cttcatatggcactggaaagatctgagtactggcgcttgtctgatgaaaaaggaaaacca
cctggagtattgggttggtggccttcacgtgcagtcacatttatagaaaatcatgacact
ggttccactcagggtcattggagattcccctatggtatggagatgcaaggatatgcgtat
atcttgacgcatcctggcactcctgcagtcttctatgatcacatcttctcacacttgcaa
caagatattgccagattaatctctgtcagacgccgtctaaagattcagtgccgcagcaag
atcaagatactcaaggcagaacaaaatttatatgcggctcagattgatgagacggttaca
atgaagattggcagtggacattttgagccaagcggtcccataaactggactgttgcggta
gaggggcacgattacaagatctgggaagcgccgtcgtag
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