Lolium rigidum (rigid ryegrass): 124669432
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Entry
124669432 CDS
T09103
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124669432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124669432
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124669432
Hops complex
124669432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
DUF8145
TPR_ELP1
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124669432
NCBI-ProteinID:
XP_047062008
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Position
7:156955547..156964540
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AA seq
957 aa
AA seq
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MYQWRKFEFFEEKAAGRGGGGGAPSVPAEIAGRVTCCSGGRGRVAVGCDDGTVGILDRGF
RLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQASSQSSAICLKVFDLDKVQEEGSSSTT
PFCVQILRIFTNLFPQAKITSFLVLEEAPPILLIAIGLDNGSIYCIKGDIARERITRFPL
QVEAVSGGASSPITGLGFRVEGQAHQLFAVTPSAITLFSLHHQPPRRQTLDQIGCEVNAV
AMSDRMDLIVGRPEAVYFYEVDGRGPCWAFDGSKKFVGWFRGYLLCIIEDQRSRKNTLNV
YDLKNRLIAHSMPVGDVSHLVTEWGYIILIMSDKRILCIGEKDMESKLDMLFKKNLYTVA
INLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYILTIGHLEPSYVIQKFLDAKRI
YNLTNYLEKLHDRGLASKDHTTLLLNCYTKQKDVEKLNHFIKDEDGVGEIKFDVETAIRV
CRAAGYHEHAMFVAKKAGRHELYLKILLEDLARYNEALQYISSLEANQAGLTVKEYGKIL
VDHRPAQTVEILLKLCTDVGDPTTRRGSNSMRLLMIPSPMDFVNIFVHSPQYLMEFLENY
IKAVKDSPAQTEIHNTLLELYISKDLSFPSMSLENGFEDQNIKDRKGKDTANGYKSGTRE
KAKLGKEDAKMAKDIVDRQRKGLALLKSAWTSEMEEPLYSIDLALIICNANAFKDGLLFL
YEKLKLYREVISCYKQAHDHEGLIACCKKLGDSSQGGDPSLWGDLLKYFGELGEDCSKEV
KEVLTYIEKGDILPPIVVLQTLSKNPCLSLSVVKDYIARKLEQESKLIEDDRKSIDKYQE
ETELMRRETEDLKTNAKVFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECA
AEYRSVMEAKQKLELNARDHDLFFRQLRGSKDGFSVVADYFSKGVVSKTTIPPENAS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcgcaagttcgagtttttcgaggagaaggcggccgggcgcggcggggga
ggcggcgccccgtccgtgccagccgagatcgcgggccgggtcacctgctgctcgggcggc
cgcggccgcgtcgcggtaggctgcgacgacggcaccgtgggcatcctcgatcgcggcttc
cgcctctcctacgggttccaggcctacgcatcatccgtcctcttcctccagcagctcaag
caaaggaatgtccttgtcaccgttggagatgatgatcaagcatcttcccagtcatctgca
atctgcctaaaagttttcgaccttgataaagtacaagaggagggttcaagttcgacaact
cctttctgtgttcagatattgcgcatcttcactaatctatttcctcaggcaaagattaca
tcatttttggttctagaagaagcccctcccattcttttgatcgccatcggattggacaat
ggttccatttactgcatcaaaggtgacattgcacgcgagcgtatcacacgcttcccgctg
caagtcgaggctgtttcaggtggcgcaagttcacctattactggtctgggctttcgagtt
gaggggcaggcacatcagctctttgccgtaactcctagtgccataaccttattcagcttg
caccatcaaccaccaaggaggcaaacacttgatcagattggttgtgaggtcaatgctgta
gcaatgagtgaccgcatggatctgattgttggtagacctgaagcagtgtatttctatgaa
gttgatggcagaggtccttgttgggcttttgatggttcaaagaagtttgtaggttggttt
cggggatatttactctgtattattgaagatcagagaagccggaagaatacccttaatgtt
tacgatcttaagaatcggttaattgcgcatagcatgcccgtgggggatgtttcacatttg
gtcacggagtggggctatattattctcataatgagcgataaaaggatactttgcattgga
gagaaagacatggaaagtaagcttgacatgctgttcaagaaaaatctttatacagttgca
atcaatcttgtacagagtcagcaggctgatcctgcttcaactgctgaggttctacggaag
tatggtgaccatctgtatggaaaacaagaatatgatgaagccatgtctcagtatatcctc
accattggtcatcttgaaccatcatatgttatacagaagtttcttgatgcaaagcgcatc
tacaacctgacaaattatctagagaagttgcatgatagaggattagcatccaaagaccac
accacccttctgttgaactgctataccaaacagaaggatgttgagaagctgaaccatttt
atcaaagatgaagatggggtaggggaaatcaagtttgatgtggaaactgccataagagta
tgccgtgcagcgggatatcatgaacacgcaatgtttgtggccaaaaaggctgggaggcat
gaactgtatttgaagattttacttgaggatcttgctagatataatgaggcgctgcagtat
atatccagcctagaggcaaatcaagcaggtcttactgtaaaagaatatggaaaaattctt
gtggatcatagacctgctcaaacagttgaaatactgttgaaactttgtaccgatgttgga
gatcctacaacaaggagaggttcaaatagcatgcgtttgcttatgataccctcaccaatg
gacttcgtaaacatattcgtgcacagcccacaatacctcatggaatttctagaaaactat
atcaaagccgtgaaagactcccctgctcaaacagaaattcataacacccttctcgagctg
tatatatcaaaagatttaagcttcccatctatgtcactggaaaatggctttgaggatcag
aacattaaagacagaaaaggtaaagatactgcaaacggctataaatcaggcacaagggag
aaggcaaaacttggaaaagaagatgctaaaatggcgaaggatattgttgataggcaaagg
aaagggcttgcattgctcaagtctgcctggacatctgagatggaagaacctttgtattct
attgatctcgctcttattatttgtaatgcaaatgcattcaaagatggtttgctatttcta
tatgagaagctaaaactctacagagaggttatcagttgctacaagcaagcgcatgatcat
gaaggtttaattgcatgctgtaagaagctaggagactcatctcaaggaggggatccatct
ctctggggtgatctgctgaagtattttggggagcttggggaagattgctccaaggaggtt
aaagaggtcttgacctacattgagaagggggatattttgcctcctattgttgtactacag
acactgtcgaaaaacccttgtttgagtctctcagttgtgaaggattacattgctcgcaaa
cttgagcaagaatcaaagctgattgaagatgatagaaaatctattgacaagtaccaggaa
gagacagaattgatgagaagggagacagaagacctcaagacaaacgcaaaggtttttcag
ctaagcaagtgtacggcgtgcaccttcacccttgatcttcctgctgtccatttcatgtgc
atgcactcgttccatcttcgctgccttggggacaacgagaaagaatgcccggaatgtgct
gctgaatatagatcagttatggaggcaaagcagaagctagaactaaatgccagggatcac
gatctgtttttcaggcagctgaggggttcaaaggacggcttttctgtggtagcagactat
tttagcaagggcgtagtcagcaaaacaaccattccacctgaaaatgcctcgtag
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