Lolium rigidum (rigid ryegrass): 124669604
Help
Entry
124669604 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124669604 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124669604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124669604
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
124669604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
DUF4172
Motif
Other DBs
NCBI-GeneID:
124669604
NCBI-ProteinID:
XP_047062144
LinkDB
All DBs
Position
7:7423310..7516448
Genome browser
AA seq
619 aa
AA seq
DB search
MASPKLAAGDGNYDFHLRSLSTASRYSAAAADPASDPNLLQSVRMVFEKCKEAKGANDEM
VARAFPVMSKLFQRCAAAPTLSTASTGVLLLTILQFFLDFGEAVLHDADGSLKTFFRSCL
SREFADPIVAERTLEFLIVNKMKILSCFPTLVPQFFPLLLKLIASNGEREFADPIVAERT
LEFLIVNKMKILSCFPTLVPQFFPLLLKLIASNGERLDKKFSEVLPLMMSAGSFLPLFLS
LMDLPMLVVALEKVERSSGTLIGSSLATIQKSAAPEMLLALMDEAYTGSAIEDQGGNSGS
DDSGPLDLADPMFLDLLKDENDGIAAKHWTSPTISSTLQAALNSPQSDRLKQSLKMAPRF
LSVYFATALRDVNNSLLCALIPVVMSRYAAMFPDKDFSFKVRKRLSDFLLSAFQRSPDII
ALLKKPITDRLGEAHGNPAKTELALHLCWAIGEHGAGGINHKDVAREIFENLELLLYENL
ATSRLGLSQEPGFDSMGATSRKSSQARLLCFVVTAIAKLATCHNELLPRARVSLAKVARS
RTLDRRVWQRACDYLGLMNEPAICLSVLGPSTAQENGPGIVNWSEGGTKMVAHIPFYLLA
EQKGPPSHDFSYADLLPAE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgccgaagctcgccgccggcgacggcaactacgacttccacctccggtcgctt
tccaccgcatccaggtactccgctgcggccgccgatcccgcctccgaccccaacctcctc
cagtccgtgaggatggtgttcgagaagtgcaaggaggccaagggagcgaacgacgagatg
gtggcgcgggcctttccggtgatgagcaagctcttccagcgctgcgctgccgcgcccacg
ctgtccacagcctccaccggcgtgctcctcctaacaattctgcagttcttcctggatttt
ggggaggcggtgttgcacgatgctgatggcagcctaaaaactttcttccgctcttgctta
agtagggagttcgcagatcctattgtcgcagagcggacacttgaattcctgatagtgaac
aagatgaagatcctgagctgttttcccaccttggttccgcagttcttcccattgctgctg
aagttaattgcatcaaatggcgagagggagttcgcagatcctattgtcgcagagcggacg
cttgaattcttgatagtgaacaagatgaagatcctgagctgttttcccaccttggttccg
cagttcttcccattgctgctgaagttaattgcatcaaatggcgagagactggataagaag
ttttcagaagtgcttccattgatgatgtcggcaggatcttttcttcccctcttcctgtcc
cttatggatctgccaatgttagtggtagcattggaaaaggtggaaagaagttccggaact
ctcatcggtagtagtttagctactatacagaagagtgctgctcctgagatgctccttgca
ctaatggatgaggcatatactggctctgcaatagaagaccaaggtggcaattcaggttct
gatgatagtggtcctctagaccttgctgacccaatgttccttgaccttctaaaagatgag
aatgatggcattgctgcaaaacattggacatcccctacgatatcttccaccttacaagcg
gcacttaacagcccacagtcagacagattaaaacagtcactgaaaatggcacctcgcttt
ctttctgtgtattttgcaacagcattgcgggacgtcaacaactcactcttgtgtgctctg
attccagttgtcatgtcaagatatgctgcaatgttccctgacaaggatttctctttcaag
gtgaggaaaaggctttcggatttcttattgtctgcattccagcgctctcctgacatcatt
gcactactgaagaagcctattactgatagacttggggaggcccatggtaatcctgcaaag
acagagttagcattgcatttgtgttgggccattggtgagcatggagcaggagggataaac
cacaaagatgtagcgcgtgaaatatttgaaaatctggagttgctcttatatgaaaacttg
gcaactagtcgtttgggattaagccaggagccaggatttgattctatgggtgcaacttct
cgaaagtcatcccaagctaggctcctctgctttgtggtgactgccattgcgaagctagca
acatgccataacgagttgcttccaagagcacgcgtatcattggctaaggttgctcggtcc
aggaccttagacaggagagtctggcaacgtgcctgtgactatttagggctcatgaatgaa
ccagccatttgtttatctgtactgggtccatccactgcccaagaaaatggtcctggtatt
gtcaactggagcgaaggaggaacgaagatggtagctcacattccattttaccttttagcc
gaacaaaaaggtccaccgtctcatgatttttcatatgcggacctcctccctgcagaatga
DBGET
integrated database retrieval system
