Lolium rigidum (rigid ryegrass): 124669988
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Entry
124669988 CDS
T09103
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124669988
03036 Chromosome and associated proteins [BR:
lrd03036
]
124669988
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124669988
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124669988
SLIK complex
124669988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HTH_CHD1_Hrp3
CHD1-like_C
HDA2-3
ResIII
DEAD
SLIDE
Chromo_MIT1
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
124669988
NCBI-ProteinID:
XP_047062467
LinkDB
All DBs
Position
7:complement(286722940..286738349)
Genome browser
AA seq
1734 aa
AA seq
DB search
MAFFSNSGSRADSGGYNLNEKADDEGAYESVADRDVDLNSGHLNLNEKADDAYHSEEEQY
EAGQPGPNSPEIKSGQNAQRLGGPSDPWGTGFLKDCRSTHTGRDEPSNSGRVMENGYVAG
SHDDMDGSGEDDELNRGHGDVPAEEMLSDDYYEQDEEDQIDSVNRRGMSHPSCSNSTVAA
KSVPSRQKKSTKRSAYGDDDDDDDDDENDDDDDDADEDDPDDVDFEPDSETDKAAVKDKL
AESENSGEEEEDDDELELSDDDEDDFIESRRQSKRLKVGGTKAPQRRKPPIQAPRKRGVS
LTDEEYSSGKDSDVPNNADFSHRSKKPVRLHLKTVGHNDVFSNVNSHNESRTSGRRRTLR
NISYAESEESDDSEEKSAKQQKILKEDQDEEDGETIERVIWYQPKGVAEDALRNDRSTQP
TVMSMPSDFDLQWDDVEFYIKWKGQSYLHCQWRTLSELRNVSGFKKVLNYMKRVSEEQRF
KRSLSREEVEVHDVGKEMELDLIKQYSQVERVFADRATKVDGDDVVVPEYLVKWQGLPYA
ESTWEKDTDIEFAQEAIDEYKAREVATAILGKAVDFQRKKSKASLRRLDDQPEWLKGGKL
RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST
LSNWAKEFRKWLPDMNVVIYVGNRASREMCQQHEFFTNKKGGRHVKFHTLITTYEVILKD
KSVLSKIKWNYLMVDEAHRLKNCEASLYITLLEFSTKNKVLITGTPLQNSVEELWALLHF
LDPVKFNSKDTFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRI
EMSPLQKQYYKWILERNFQNLNKGVRGNQVSLLNVVVELKKCCNHPFLFESADHGYGGDS
IGDRNKVERIVMSSGKLVLLDKLLLRLRETNHRVLIFSQMVRMLDILSEYLSLRGFQFQR
LDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ
AMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETKK
GASMFDKNELSAILRFGAEELFKEEKTDEETKRKLESMDIDEILERAEKVETKAAEGEEG
NELLSAFKVANFSSGEDDATFWSRLIQPDTEDMVQETLAPRAARNKKSYVEDHQLDKNSN
RKRRAVDAQEKPRRRSSRTVDTIVSLPLIDGAVAQVREWSFGNMPKKDASRFVRAVKKFG
NPSQIGLIVDDVGGAIAKAPYEAQIELYDLLIDGCQEAVKENTDIKGTVLDFFGVPVKAY
ELLARVEELQCLAKRIARYKDPVRQYRIQSPYKKPQWSASCGWIETDDARLLLGIHWYGY
GNWEKIRLDPNLGLTTKIAPATLGERETFLPRAPNLDNRASALLQKEFANLSGKSSKAKG
GSSQPVNSESNGGARSSRGRQKDAKPKDDIKSIKDDIKKRKVVEAEAREEGEISESEAET
KYRLDKEEKWLEWCSEVLDDEQDILKRLDRLQNTSVNLPKEKVLSRIRRYLQIIGEKIGK
VVVQHGESYKQSRMTTRLWNYVATFSNMSGEQLRDLYLKLSQDQMEAGVGPSHGGNFAPV
PPNRGGASNQPHPPRNQRSTRSFQSTPESLNNGENTGNSEAWKRRRRADPENQFDTQPSY
QPPPIMTNGNRVQESSSSAGILGWGPVEMRRYGTERPKRGVHPNRFPGGPGPLL
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaattctgggagcagggctgactcaggagggtacaacttgaacgag
aaggccgacgacgaaggtgcatacgagtcggttgcggatagggacgtcgacttgaactct
ggtcatctaaacttgaatgagaaggctgatgatgcttaccacagtgaggaggagcagtac
gaagctggccagccagggcccaactctcccgagattaaatcagggcagaatgcccagaga
ctaggtggcccgtctgacccgtggggtacaggttttttgaaggattgcaggtccacacac
accggaagggatgagccttcaaatagtggtagggtaatggagaacgggtatgtggctggt
tcacatgatgacatggatggtagtggagaagatgatgagctaaacagagggcatggggat
gtgccagctgaggaaatgctttctgatgactattatgagcaggacgaagaggatcagatc
gattcagtgaatcgtcgtgggatgagccacccaagctgttcaaattctactgtcgcagca
aaatctgtcccctcaagacaaaagaagtcaacaaagcgtagtgcttatggcgatgacgat
gacgacgatgatgatgatgagaatgatgatgatgacgatgacgcagatgaagatgatcca
gatgatgtagattttgagccagacagcgaaaccgacaaggctgctgttaaggataagctt
gcggagagtgagaactcaggtgaagaagaagaagatgacgatgagcttgagctctcagat
gacgatgaagatgattttattgagagtaggaggcaatcaaaacgacttaaggttggagga
actaaagctccccagcgaagaaagcctcccatccaggctccacgcaaacgaggggtatct
ctcacagatgaagaatattcttcaggaaaagactcagatgtacccaataatgctgatttc
agtcaccggtcaaaaaaacctgttaggttgcacctgaaaactgtgggccataatgatgtt
ttctcgaatgtcaattcccataatgaatcccgaacttctgggaggaggaggacactgaga
aatatctcatatgctgaaagtgaagaaagtgacgatagtgaggagaagtctgctaaacaa
cagaagatcttgaaggaggatcaagatgaggaagacggagaaacaattgaaagggtcatt
tggtatcagccaaagggtgttgctgaagatgcactaaggaatgatcgatcgactcaacct
actgttatgagcatgccatcagattttgatctgcaatgggatgatgtagagttctatata
aaatggaaagggcagtcttacctacattgtcagtggaggacactgtctgagcttcgtaat
gttagtggatttaaaaaggttctaaattacatgaaaagagtgtctgaggaacagaggttc
aagaggtcgctatcacgcgaagaggtcgaggtgcatgacgtgggcaaggaaatggagttg
gatcttattaagcaatatagccaggttgaacgggtatttgctgatagggcaaccaaagtg
gatggtgatgatgtggtggtgccagagtatttagtgaaatggcaaggacttccttatgca
gaatctacctgggaaaaagatacagatattgaatttgctcaagaagcaatagatgaatac
aaggcccgtgaagttgccactgctatactgggaaaagcggttgatttccaaaggaagaaa
agcaaagctagtttgcggaggcttgatgaccaaccagagtggctaaaaggaggtaaactt
cgcgattatcagcttgaaggcctaaactttctcgttaatgggtggaggaatgatactaat
gttattcttgctgatgagatgggtctgggaaaaaccattcaatcagtttccatgcttggc
ttccttcataatgctcaagaaattaatggtccatttcttgttgtcgttccactttcaaca
ttgtcaaattgggccaaagaatttcggaagtggctacctgacatgaatgttgtaatttat
gttggaaatcgcgctagcagagagatgtgtcagcagcacgagttttttacaaataagaag
ggaggccggcatgtaaaattccatacgttgattactacttatgaggtgatacttaaggac
aaatctgtcctttcaaaaatcaaatggaattatcttatggttgatgaagctcaccgtttg
aagaactgtgaagcatcactgtatattactcttttggaattcagcaccaaaaataaggtt
ctaataactgggacccctttgcagaatagtgttgaagagctgtgggccctacttcatttc
ctcgatccagttaaattcaacagcaaggatacttttgttgagagatacaaaaatttgagt
tcgtttaatgaaactgagcttgcaaatcttcacaaggaattgaggccccatattttaagg
cgagttataaaagatgttgagaaatctttacctccaaaaattgagcggattcttcgtatc
gaaatgtctcccctacagaaacaatattacaagtggattctagagcgaaattttcagaat
ctgaataaaggagtccgtggaaatcaggtctcgcttttgaacgttgttgtcgagttgaag
aagtgctgcaatcatccattcttgtttgaaagcgccgatcatggttatggtggagacagc
attggtgatcgcaataaagttgaacgcattgttatgagtagtgggaaattagttttatta
gacaaactattgctaagactgcgggagactaatcaccgagtgcttatattctctcagatg
gtgaggatgttggacatcctttctgagtacctgtcccttcgaggattccagtttcagagg
cttgatggcagtacaagagcggatcttcgtcatcaggccatggagcactttaatgctcct
ggaagtgatgatttttgtttccttctgtctacacgtgctggcggacttggtatcaatctt
gcaacagcagatacggtgataatctttgattcagattggaatcctcagaatgatctacag
gcgatgagtagggcacataggattgggcaacaagagactgttaacatctatcgtttcgtc
acctgcaaaagtgttgaagaagatatattggagcgggcaaagaaaaaaatggttcttgat
cacttagtgattcagaagctgaatgctgagggcaggctcgagaagaaagaaactaaaaag
ggagcatcaatgtttgacaagaatgaactttcggccatacttaggtttggggccgaggag
ttgttcaaagaagagaagaccgatgaagagaccaagaggaagctcgaaagtatggacatc
gatgaaattcttgagagagctgagaaagttgaaacaaaggctgctgaaggagaggagggc
aatgagcttcttagtgctttcaaggttgccaatttttcgagcggtgaggatgacgccaca
ttctggagtagactgatacaaccagatactgaagatatggttcaggaaactttagcacct
cgtgctgcacgaaataaaaagagctatgttgaagatcaccaacttgacaaaaatagcaac
aggaaacggcgagcggttgatgcacaagaaaagccgagaaggcgctctagcagaacagtc
gatacaattgtttcattaccattgattgatggagctgtagctcaagtacgggaatggtca
tttggaaacatgcctaagaaggatgcctcccgatttgttcgagcggttaaaaaattcgga
aacccaagccaaattggcttaattgtggatgatgtcggtggtgcaatagccaaggctcca
tatgaagcacaaattgagctgtatgatttgctcattgatggctgtcaggaagctgttaaa
gagaacacagacatcaagggcacggtgttggatttttttggtgtacctgtgaaggcctat
gagttattagctcgtgtcgaagagcttcagtgcttggcaaagcgtattgcacgttacaaa
gatccagttaggcaatacaggatccaatctccttacaaaaagccgcagtggtcagcaagc
tgtggatggattgaaactgatgatgcaaggttgctgcttggcattcattggtatggttat
ggaaactgggagaagatacggttggatccaaatcttggcctgacaacaaaaattgcacca
gcaacacttggtgaaagagaaacgtttttaccacgtgccccaaacttggataatcgtgct
agtgctctcctgcaaaaggaatttgccaatctgagtggaaagagctcaaaagccaaagga
ggctctagtcaacctgtcaatagtgaaagcaatggtggtgcccgatcgtcgagaggccga
caaaaagatgcaaaaccaaaagatgatattaagtcaatcaaagatgacattaagaaacgc
aaggtggtggaagctgaagcaagagaagagggtgaaatttcagagtctgaagcagagact
aaatatcgtttggacaaggaggaaaagtggctggaatggtgctctgaagttttggatgat
gagcaggacatattgaaacgcctggataggctacagaatacaagtgtaaatcttccgaag
gaaaaggttctttcaaggattcgcaggtacctccagataattggtgaaaagataggaaag
gttgttgtccagcatggagaatcatacaagcaatcccgtatgaccacaagattatggaat
tatgtggcaaccttttcaaatatgtctggggagcaattgcgcgatctctacttaaaactt
agtcaggaccaaatggaagctggagttggcccctcacatgggggcaattttgcaccggtt
cctcccaacagaggaggtgcttcaaatcagcctcatcctcctagaaaccaaaggtcaaca
aggtctttccagagcactccggagtctctcaataatggtgaaaacactgggaattcggaa
gcttggaaacgacggaggcgagctgatccagaaaatcagtttgacacccaaccatcgtat
caacctcccccaatcatgacaaacggaaacagggtgcaggagtctagcagttctgctggt
attcttggttggggtcctgttgaaatgagacgatatggcacggaaagaccaaaacgaggt
gttcatcccaatcgatttcctggtgggcctggacctttgctttag
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integrated database retrieval system
