Lolium rigidum (rigid ryegrass): 124670157
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Entry
124670157 CDS
T09103
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124670157
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124670157
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124670157
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124670157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
TTI1
PDS5
Adaptin_N
UTP20
Cnd1
Sec7-like_HDS
ParcG
HEAT_DAAF5
RRN3
MMS19_C
Dopey_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
124670157
NCBI-ProteinID:
XP_047062619
LinkDB
All DBs
Position
7:194491300..194503885
Genome browser
AA seq
1440 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALDAAARRGLAPAEVTALVDTCVDLTRDANFRVAQ
GGLQALAAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVREAARQLLITLMEIASPTIIL
ERAGNYAWAHKSWRVREEFVLTVATAVGLFASTELLMQRVLLSPVLQLMNDSNQSVREAA
ISCIEEMYKNMGSQFHEELQRHNLPPYMLKEINSRLNRIEPKVPSSDGAATQYKVAESRS
LSVNPKRGSPKTKSTTRESTLFGGDTDITEKPVEPIRVHSEKELLREFEKIAATLVPEKD
WSVRIAAMQRIEALIYGGAIDYPSFLVLLKQMVPPLSTQLADRRSTIVKQACHLLNVLSK
ELLGDFEPCAEQFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARVLPRVADTAKNDR
SAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARTCYRLFTK
TWPERSRRLFMLFDPAIQRTINDEDGVHKRYASPSLRERVVQPSRASSHAGGTHMPGYAT
SAIVAMDKSAAISSDSSLSSNNLRLSHSKTTSRISERSLESVLNSSKEKVSAIESLLKGA
SISDRQNLSVARSTSLDLGVDPPSSRDPPVPLAAPASNHLSLQNSTFLDSTIPSVARNGS
SRLLDTMSTQLATRERSRSPYLSKLPSESMTGLSLPYVRRSAERLQDFGRMDESNDTRST
RRYPQMHTEKNYVDMPYRDAPAHRDSHNSNVPNFQRPLLRKQVISRASGSGRHSFDDSQA
PSSDVSRYTDTLVSLHDALSEGLNPSSDWIAKVSAFDFIRNIVQQGLKGVQEISQNFEKV
MKLFFRHMDDPHHKVAQAAFSALAEIIPACKKPFESYVERILPHVFSRLIDPKELVKKPC
SLTLEIVGRIYAVDMLLPALVRSLDEQRSPKAKLAVIEFANKSFGRYTVDSEGYSNSGFL
KLWLSKLAPLVNEKNAKLKEASISGIISVYSQFDSTAVLNFILSLSVEEQNLLRRALKQK
TPRIEVDLVNYLQSKKERSRPKSYDQADFGTSSEDGYSQTVKNSYPFGRYSSGSPDAEGA
KKTNTVQESTLHNVSMGRTTSDMSVDTNQSSDLAAGIEVLLSRSRESKKNTSSVVEDKRS
WTNYPEKTDASLDGETPLSTPRLDFTQLRNPDGHNAISLTTVKNVQDGDLVVNLSSIKTS
LHADNGLSIPQLLHQISTDSEVSSLEKNASLQQLIKASLSNDSSIWSKYFNQILTAVLEV
LADSDSSTRELAVSLIGEMLNNQKDAMEESIEIVLEKLLHVTKDMVAKISDEANRCINVL
LSKYDHFRCLSVVVPLLVSDDEKTLVVSINCLTKLVAHLSQEELMNQLPTFLPALFDAFS
NQSPDVRKTVVFCLVDIYIILGKSFVPYLEGLSSTQLRLVTIYANRISQARSGAPIDANQ
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgccaaggacaccaaggagcggctggcgggggtg
gagcggctgcacgaggcgctggacgcggcggcgcgccgcgggctcgcccccgccgaggtc
acggcgctcgtcgacacctgcgtggatctcaccagggacgccaacttccgcgtcgcgcag
ggcggcctgcaggcgctcgccgccgccgccgtgctcgccggggaccacttcaagatccac
ctcaacgcgctcgtccccgcagccgtcgagcggctcggggacggcaagcagcccgtgcgc
gaggccgcgcgacagctcctcatcaccctcatggagattgcttcgccaacaatcattctc
gagagggctggaaattatgcatgggctcataagagttggagggttcgggaagagtttgta
cttacagtggcaactgcagttggactgtttgcttctacggagcttctcatgcaacgggtt
ttattgtcacctgtcttgcagttgatgaatgactcgaatcaaagtgttagagaagctgct
atatcttgtattgaggaaatgtacaagaacatgggatctcagtttcatgaagagttgcag
cgccataatctgcctccatacatgctaaaagaaataaattcaagattgaatagaatagaa
ccaaaggtcccctcatctgatggtgctgcaacacaatataaggttgctgaatctagatca
cttagtgttaacccgaaaagaggcagtccaaagacgaaaagcacaacgagggaaagcacg
ctatttggaggtgacacggatataacagaaaaaccagtcgaaccaataagagttcactca
gagaaagaattacttcgtgagtttgagaagatcgcagctactcttgttccagaaaaggac
tggtcagttcgtattgctgccatgcaaaggattgaagccttgatctatggaggcgctatt
gactacccgtcatttcttgtgctcttgaagcagatggttcctccattgtccactcagcta
gccgatcgacggtctaccattgtaaagcaggcttgccatctacttaatgtgctatccaaa
gaactccttggtgactttgagccatgtgctgaacaatttattccaatgctttttaagctt
gttgtcataactgtgcttgtcattgctgaatctgcagacacctgcataaaaactatccta
cgaaactgcaaggttgcacgagttcttcctcgtgtagctgacacagctaagaatgatcga
agtgcagttctccgtgctaggtgctgtgaatatgctcttctaatattggagtactgggct
gatgccccggaaatacagcgatcggctgatctatacgaagatctaataaagtgctgtgta
gcagatgcaatgagtgaggtccgtgcaactgcaagaacttgctatagattattcacaaag
acatggcctgaacgctcacgccgtctttttatgttattcgatcctgctatacagaggaca
ataaatgatgaggatggtgtgcacaaacgttacgcttctccctcactacgtgagagggtt
gtgcagccttctcgtgcttcatctcatgcaggaggcacacatatgccaggatatgccact
tcagctattgttgcaatggacaagagtgcagctatttcttcagattcatctctttcatcg
aacaatcttcgtttatcgcactcaaagacaaccagcagaatttctgaaagaagcctagaa
agtgtgcttaactctagcaaagagaaggtttctgccattgaaagtctgcttaaaggtgca
agcatatcagataggcaaaatctctcagttgcacgctcaacaagcttggaccttggggtt
gatcctccatcatctcgtgatcctcctgttcctcttgcagcaccagcttcaaatcatcta
tccttgcagaactctacattcttggattcaaccattcctagcgttgcgcgaaatggaagt
tcacgtttactggatacaatgtcaacacagttggctaccagagagcgatcaagatcacca
tatttgagtaaactgccatccgagtccatgacaggcttatcgctaccttatgtgagaaga
tctgcggagaggctacaagattttggccgcatggatgagagtaatgatacccgatcaact
aggcgatatcctcaaatgcacaccgagaaaaactatgttgatatgccttatagggatgca
cccgctcacagagattcacataatagcaatgtcccgaatttccagagacctcttctaaga
aagcaggtaatatcaagggcttctggaagtggcagacacagttttgatgatagccaagca
ccatctagtgatgtgtctagatatacagacactctggtatctctgcatgatgcactttct
gagggtctgaatcctagctcagattggatagcaaaagtctcagcttttgattttattcgg
aatatagttcaacaaggtctgaaaggtgtgcaagaaattagtcagaattttgaaaaggtc
atgaagctgtttttccgtcatatggacgatcctcatcataaggtagcacaagcggccttt
tctgcacttgcagagattattccagcttgcaagaagccatttgagagttacgtcgaaagg
attttgccacatgttttttcccgccttattgatccaaaagagttggtaaaaaaaccatgt
tcgttgacgttggagattgttggtcggatatatgctgttgatatgttgctacctgcccta
gtacgctcgctagatgaacagaggtccccaaaggcaaaactggctgttattgaatttgca
aacaaatcattcggcaggtacactgtagattctgaaggttatagtaacagcggcttcctt
aagctatggctttcaaaattggcacctttagtaaatgaaaagaatgcaaaattgaaggag
gcatctatttctggtatcatatctgtgtattctcagtttgattctacagcagtgctaaat
tttatattaagcttgtcagttgaagagcaaaacctattgaggcgtgccttgaagcaaaaa
acacctcgtattgaggttgatctggttaactacttacagagcaagaaagaacgctcccgt
cctaaatcttacgaccaagcagattttggaacttcttccgaagatggttattcacagaca
gtgaaaaacagctatccttttgggcggtattcttctggttcacctgatgctgaaggggca
aagaagacaaatacagtgcaagagtccacactgcataacgtctctatgggtcgaacaact
tctgatatgagcgtagatactaatcaaagctcggatctggctgcaggaattgaagttctt
ttatctagaagtagagaatcaaagaagaatactagctcagttgtggaagacaaacgttct
tggacaaactatcctgaaaaaactgatgcctccttagatggcgaaactcctctgagcact
cctcgcttagacttcacccaactccgcaatcctgatgggcataatgccattagtttaact
actgtaaaaaacgttcaagatggagatttggttgtaaaccttagttctataaagaccagc
cttcatgctgacaacggtttgagcataccacaacttctccatcagataagcaccgacagt
gaagtatcaagtttggaaaagaatgcatcattgcaacagttgattaaagcttctctttct
aatgacagctccatttggtcaaagtacttcaatcaaatattaacagctgtacttgaggtg
ctggctgactccgactcgtctactagggagcttgctgtatccttaattggcgagatgctc
aacaatcagaaagatgctatggaagaatcaattgagattgttcttgaaaaactcctgcat
gtgaccaaagatatggtggcaaagatttctgacgaagcaaaccgatgcataaatgttctg
ttgtcaaaatatgaccatttcagatgtctttctgttgtagtacctcttttggtcagtgat
gatgaaaagacgcttgttgtgtctatcaactgtttgacaaagcttgttgcacacctttct
caggaggagttgatgaatcaattgcctacatttttgccagcactctttgatgcttttagt
aaccaaagtccagatgttcgaaagactgttgtattctgcttggtggatatctacatcatt
ctcgggaaatcgtttgttccctatctggaagggcttagcagcacccagctgcgcctagta
accatctacgcaaaccggatttcgcaggcaaggtctggtgcgccaattgacgctaaccaa
tga
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