Lolium rigidum (rigid ryegrass): 124670364
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Entry
124670364 CDS
T09103
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124670364
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124670364
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
124670364
NCBI-ProteinID:
XP_047062831
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All DBs
Position
7:99654596..99656676
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AA seq
631 aa
AA seq
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MQVLVDNGVVQVSLSNPEGHITGVRYGGERNLLHSKHGGNSGGYWDMVWNTPGSGRQGNY
QILEGSDFKVVTATEEKVELSFRRTYNASSQSGGLPLSVDKRVVVLRGSPGFYCYAVVEH
AADAPAVSVSEARLAFKLNTARFNYMAVSDAIQRYMPSAKDRESPRAKRLAYGEAVLLVD
PSNPRFKGEVDDKYQYSLDNKDNRVHGWVGAGQGSPIGFWVVTPSNEFKIGGPLKRELTS
HVGPTSVTMFLGTHYVGNDIVARIDDGEYWKKVMGPVFVYLNSNPSKGDPRALWEDAKAR
ADAEAAKWPYGFVESPDFHKAAERGSVVGRLLVRDRHVSRQDMPAGTAYVGLAAPGQAGS
WATHSKGYQFWTTTSPSSGGKFTIENVRAGEYSLYAWVPGFLGDYVHASRVTVTPGGAVE
LGDVVFEPPRSGPTLWEIGVPDRSAAEMFVPAVAGPKYNNSELLAGKDAYRQYGLWERYA
DLYPDGEDPVFTVGESHHSRHWYFAHVTRKAGDDGGFAPTTRQVRFNLGRVAANGVYTLR
VELAAAHKARLQVQVNGATGRRPLATPTFGDGNAIARHGDHGTQWSFEFPIRGSLLREGE
NNIAITQTRALNPFFGVMYDYLRLEGPRGYS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgctggtggacaacggcgtggtgcaggtgtcgctgtccaaccccgagggccac
atcaccggcgtccgctacggcggggagcggaacctcctgcactcgaaacacggcggtaat
tcaggcgggtattgggacatggtttggaacaccccgggctccggccgtcaaggaaactac
caaatactggagggctcggatttcaaggtggtgaccgcgacagaagagaaggtggagctc
tccttccggcgcacctacaacgcgtccagccagagcggaggcctccccctgagcgtggac
aagagggtggtggtgctgcgcggcagccccgggttctactgctacgccgtggtggagcac
gccgctgacgcgcccgccgtatccgtcagcgaggcccgcctcgccttcaagctcaacacg
gctcggttcaactacatggcggtctcggacgccatccagcggtacatgccgagcgccaag
gaccgggaatcgccgcgcgccaagcggctggcctacggcgaggccgtgctgctcgtggac
ccgtccaacccgcggttcaagggggaggtggacgacaagtaccagtactcgctcgacaac
aaggacaacagggtgcacggctgggtcggcgccggccagggcagccccatcggcttctgg
gtcgtcacgcccagcaacgaattcaagatcggcggcccgctcaagcgggagctcacctcg
cacgtcggcccgacctccgtcaccatgtttctgggaacgcattacgtcgggaacgacatc
gtggctaggatcgacgacggtgagtactggaagaaggtgatgggccccgtgttcgtctac
ctcaactcgaacccgagcaagggagacccgcgcgcgctctgggaggacgccaaggcgcgg
gcggacgccgaagctgccaagtggccgtacggcttcgtggagtcaccggacttccacaag
gccgccgagcgaggctccgtcgtcggcaggctgctggtcagggataggcacgtgagccgc
caagacatgcccgccgggacggcgtacgtcggcctggctgcgccggggcaagccggctcg
tgggcgacgcacagcaagggctaccagttctggacgacgacgtctccttcctccggcggc
aaattcaccatcgaaaacgtccgggcgggcgagtacagcctctacgcgtgggtccccggc
ttcctcggtgactacgtgcacgcctcccgcgtgaccgtcacccctggtggcgccgtcgag
ctcggcgacgtcgtgttcgagccaccgcggtccggaccaacgctgtgggagatcggcgtc
ccggaccggagcgcggcggagatgttcgtcccggccgtcgccggcccgaagtacaacaac
agcgagctcttggctggcaaggacgcgtaccggcagtacggcctgtgggagcggtatgcc
gatctgtaccccgacggcgaggaccccgtcttcaccgtcggtgagagccaccactcccgg
cactggtacttcgcgcacgtcacgaggaaggccggcgacgacgggggcttcgcgccgacg
acgcggcaggtgcggttcaacctgggccgcgtcgcggcgaacggcgtctacacgctgcgt
gtcgagctcgcggccgcgcacaaggcgaggctgcaggtacaggtgaacggggcgactgga
aggaggccgctcgcgacgccgacgttcggcgacggcaacgcgatcgccagacatggcgat
catgggacgcagtggagcttcgagttcccgatcagagggagcctgcttcgggagggcgag
aacaatatcgcaatcacgcagacgagggcgctcaacccgttcttcggggtcatgtacgac
tacctccggttagaaggtcctcggggttattcgtag
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