KEGG   Lolium rigidum (rigid ryegrass): 124670422
Entry
124670422         CDS       T09103                                 
Name
(RefSeq) SART-1 family protein DOT2-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124670422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124670422
   04121 Ubiquitin system [BR:lrd04121]
    124670422
Spliceosome [BR:lrd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124670422
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    124670422
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124670422
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 124670422
NCBI-ProteinID: XP_047062885
LinkDB
Position
7:complement(26577218..26582579)
AA seq 815 aa
MGEADDARDAVVEEMDIDGGDRHRGKDRRDRHRREEKDHQGSGRRDKDREKDKDERRRDK
DDTKHRDRDRDRDRDRDRDSSKNRDRDSERDRGRDRDRVKDRERDTERERRDRDKERSRN
REKTKEKEDREHDKSRGKDRGEEADLSKREEGDQKKGVDPSGETDQASTSVLRERIARAK
EERLKEKKEGGILDDKDDASEILSWVGKSRKLDEKRQAEKEKALRLARVFEEQDDMLAEN
SDDDDDDVEDKHGGDHLSGVKVLHGLDKVIEGGAVVMTLKDQSILADGDINEEADMLENI
EIGEQKQRNEAYKAAQKKGTYEDKFSDDPLSKKPMLSHYDDPMEDEGVTLDEGGRFTGEA
EKKLEELRKRIEGGSVQKKTEDLTSAAKMTSDYFTADEMLQFKKPKKKKSHRKKEKLDLD
ALEAEAIASGLGAADRGSRNDGKRQAAREMEQKADAEKRSTAYQAAISKAEEASKALRHE
KMPGKPAEEEELVFGDDYEDLQKSLEQARKLSLRKQEEAAGSGPQSVAELATANKGQGDA
DAAEGDAQQNKVVITEMEEFVWGLQLNEETRKPEAEDVFMDEDDDDMPSGTVAKDDMNRL
GVIKEETVIEDPKKDAEEEEVVPDEVVHEAAVGKGLAGALKFLQERGTLNEGTNWGGRTT
DKKKSKLVGIEDGPKEIRIERMDEFGRVMTPKEAFRDLSHKFHGKGPGKMKLEKRQKKYQ
DDLKTKQMKSSDTPLMSAEKMREAQARGQTPYLVLSGNAKSGPAGDASGFASVERSHPGS
LTPMLGDKKVELFLGIKRSAQSGGMPPLPPKKPKH
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgggggaggctgacgatgctagggatgcggtggtggaagagatggatatcgacggtggg
gataggcaccgtggcaaggacaggagggataggcacagaagagaggagaaggatcaccag
ggcagtgggaggagggacaaggatagggagaaagataaggatgagaggaggagggacaag
gatgataccaaacatagggacagagatagggatagggacagagacagggacagggatagc
agcaagaacagggacagagattcagagcgtgaccgtggccgggaccgtgatcgagtcaag
gatcgggaaagggatacagagagggagcggagggatagggacaaagagaggagccgcaac
agggagaagaccaaggagaaggaggatagagaacatgacaagtcgaggggaaaggaccgt
ggagaagaggcagatttgtctaagcgagaagagggagaccagaagaagggagttgatccc
tcaggagagactgaccaggcctccacgtctgtcctcagggagcgcatcgctagggcaaag
gaagaaaggttgaaggagaaaaaggaaggaggaatactggatgataaagatgatgcttca
gagatattatcatgggtaggcaagagtcgtaaacttgacgaaaaaagacaagctgaaaaa
gagaaggcgttacgtcttgcacgagtatttgaggaacaggatgatatgttggcagaaaat
agtgatgatgatgatgatgatgtggaagataaacatggcggagatcacttatctggagtg
aaggttcttcatgggcttgacaaagtcatagaaggtggagcagttgtcatgactctcaaa
gatcagagtatcctggctgacggggacatcaatgaagaggctgatatgcttgagaacatc
gagattggtgagcagaagcaaagaaacgaagcttacaaggctgcgcagaagaaaggaaca
tacgaggacaagttcagtgatgacccattgtcaaagaaacctatgctatcgcattatgat
gatccaatggaagatgagggagtgacacttgatgaaggtggacgcttcactggtgaagca
gagaagaagttggaagagctccgcaaaaggattgaaggtggttctgttcaaaaaaagaca
gaagaccttacttctgcagcaaagatgacatcagattactttaccgctgatgagatgctt
cagtttaagaaaccaaagaaaaagaaatcccataggaagaaagaaaagctagatcttgat
gcacttgaagcagaagctattgcttctggattgggagctgctgatcgtgggtcaaggaat
gatggtaaacgacaggctgctagggagatggagcaaaaggctgatgccgaaaagcgaagc
actgcataccaagcggccatttcaaaggctgaagaggcatcaaaagcactgcgtcatgag
aaaatgcctggtaaaccagctgaagaggaagaactggtttttggtgatgattacgaagat
ctgcagaagtctctggagcaagcaaggaagctatctctaaggaagcaggaagaggctgct
ggttctggtcctcagtctgtagcagaactggctactgcgaacaagggccaaggagatgct
gatgctgcagagggagatgcacaacagaataaagttgttatcacagagatggaagagttt
gtgtggggcctgcagttaaatgaagaaacacgcaagccagaagcagaagatgtgtttatg
gatgaagatgatgatgatatgccttcaggtaccgtagcaaaagatgacatgaacagattg
ggagtgatcaaagaggaaactgtcattgaagaccctaaaaaggatgcagaggaagaagaa
gtcgtaccggatgaggttgtgcatgaagctgcagttggcaagggtttggctggagctttg
aagtttcttcaggagcgaggtaccctcaatgagggcacaaactggggaggcagaaccaca
gacaagaagaaaagcaagcttgttggtattgaggacgggccaaaagaaattcgcatagaa
agaatggatgaattcggtcgagtgatgacacctaaggaggcatttcgggatctgtcgcac
aaattccatggcaagggaccaggcaaaatgaagctggaaaaacggcagaagaagtaccag
gatgatttgaaaacaaagcaaatgaaatcttctgacacgcctttgatgtccgcggaaaag
atgagagaggctcaagctcgtggccaaacaccataccttgtcttaagtggcaatgcaaaa
tcaggtccggcaggtgacgctagtggttttgctagcgtggagagatcacatcctgggagt
cttacgcccatgcttggggacaaaaaggtggagctctttttgggcatcaaacgaagtgcc
cagtctggaggcatgcctccgctgcctccaaagaagccaaaacactga

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