Lolium rigidum (rigid ryegrass): 124670676
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Entry
124670676 CDS
T09103
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124670676
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124670676
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124670676
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C85
124670676
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
124670676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
UBA_9
Motif
Other DBs
NCBI-GeneID:
124670676
NCBI-ProteinID:
XP_047063106
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Position
7:complement(142253928..142258541)
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AA seq
556 aa
AA seq
DB search
MTRIFVQRGAGGSSSNSGRSGSQAAAQQQQQQQNQPAPAAREEEITPQPQPPEPSASDEI
TEHLPEGDESSSNKPSRPVDPVSESSSCAEERSEREKPPRDDSNATDPAFLAELSGLQCS
DQSEQGSSGQSGAGGSPQMAGAASHPPPPPAPPPKPSSSANNGLRRMGSGSSNSVRIGSS
RRPVAWPPVAARTSATGSRPSSPRSLADCEGYNSADEQGPCYTSSYDDSSTCPDVIYLPQ
EREHMFEHDLRRVKGFEIRKMAADGNCLFRAVADQVYGDPETYDMARQMCVDYMERERDH
FSQFMTEGFMSYCKRKRRDKVYGNNIELQAFAEMYNRPIHIYSYSTEPINIFHGNYSTDV
PPVRLSYHHGNHYNSVVDPRRLTVGAGLGFSSLRGTNSVDRDQVKAAIKAQQDQQIENAL
LAEGRLYSDLELTEKEIERMVMEASRAEFLNQQQVNFRESSMSAGAEPSSSAAISGSSGS
AAVGDKGSENCFVLPDTVLTRSMQLLLAMGFSYIQVMEAYSIFGEDVDSMICYLVEMGGA
GASAGGSNRRKGKAAE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggatcttcgtgcagcgtggggccggtggctcttcgtccaactccggccgctca
ggctcacaagcagcagcgcaacaacaacaacaacagcagaaccagccagcaccagctgcc
cgggaggaggagattacaccacagccacagccaccggagccttcggcttccgatgaaatc
accgagcatctacccgagggcgacgagagcagtagcaataagccttcgaggccggttgat
cccgtgtccgagagctcgagctgcgcggaagagagatctgagagggagaaacctcccagg
gatgactcaaatgcgaccgaccccgcattcttggcggaactatcgggcctccagtgttcc
gatcagtctgagcagggcagttcaggtcagtcaggcgctggcggctcaccgcagatggct
ggcgcggcatcgcacccaccgcctccgccagctccgccgccaaagccatcatcgtctgct
aataatggcttgaggagaatggggtctgggagctcaaacagtgtgcggattgggtcttca
agaaggcctgttgcttggccaccggtggcagcccggacatctgctacggggtcccgccct
tcttcgcctaggtcgcttgctgactgtgaagggtacaatagtgcggatgagcagggtccc
tgttacacctccagctatgatgattcgagtacttgccctgatgtaatttatttgcctcag
gaaagggagcatatgttcgaacatgacctaaggcgagtgaaagggtttgaaataaggaag
atggctgcagatggaaattgcctgttcagagcagttgccgatcaggtttatggtgatcca
gaaacttatgacatggcaaggcagatgtgtgttgattatatggaaagagagcgggatcat
ttctctcagttcatgactgaaggcttcatgtcatactgcaagaggaagagaagagataag
gtatatggcaataatattgagctccaggcatttgctgagatgtacaatcgtccaattcac
atatattcctacagtacagagcccattaatatttttcatggaaattatagcactgatgtt
cctccggttaggttaagctaccatcatggtaatcattacaattcagttgttgatcctcgc
cgtctgacagttggggcaggcctgggatttagctcccttagagggactaatagtgtggat
agggaccaagtgaaagctgcaataaaagctcagcaagaccagcagattgagaatgcactt
ctggctgaagggcggctctactctgatctggagttgactgagaaggaaatagagcggatg
gtgatggaggcctctcgggcagaatttcttaaccagcagcaggttaacttcagagagtca
tcaatgtcagcaggggcagagccatcttcttctgccgcaattagtgggtcgtctggttcg
gccgcggtaggggataaaggcagtgagaattgttttgtacttccagacaccgtgctgact
cgcagcatgcagttgctcctagcaatgggctttagttacatccaagtgatggaagcctac
agcatattcggcgaggacgtggactcgatgatctgctacctagtggagatgggaggcgcg
ggagcctctgcaggtggcagcaaccgccggaaaggaaaggctgctgagtga
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