Lolium rigidum (rigid ryegrass): 124670744
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Entry
124670744 CDS
T09103
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124670744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124670744
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124670744
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124670744
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124670744
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124670744
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124670744
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124670744
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124670744
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124670744
Exosomal proteins of other body fluids (saliva and urine)
124670744
Exosomal proteins of breast cancer cells
124670744
Exosomal proteins of colorectal cancer cells
124670744
Exosomal proteins of bladder cancer cells
124670744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124670744
NCBI-ProteinID:
XP_047063179
LinkDB
All DBs
Position
7:complement(132013381..132017845)
Genome browser
AA seq
589 aa
AA seq
DB search
MSRMPLPPPSPPSLSSKGPTLPFSPKKSPPMPVYKDLHFNRDLSATKKLQVGVDLVARLV
GVTLGPKGRNVVLGNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAGD
GCTTSIILAQGLIAEGMKVLAAGMNPVQIARGIGKTSDALVSELKLMSREIEDHEIVHVA
AVSAGNDYSVGNMISDAFKRVGREGMVRIENGRGIENSLDIVEGMQFERGYLSPYFVTNH
ASMSTEFTDCKILLADKIISDPRELLRVCFSAVKEDFPLLIIAEDIEEEALATLTRNKLS
GMIKVAATKAPSFGEQKTQCLEDIAIITGGTVVREDMGYTLEEAGKEVLGSASKVVIKND
STLIVTDGSNLHAVEKRVAQMKGQIENSKERYQKKILGERIARLCGAIAIIQVGAQTVIE
LKDKKLRIEDALNATMAAIEEGVVVGGGCSLLRLSKKIDIIKESLDNAEQKIGADIFKNA
LSYPTTLIANNAGMSGKFVVEKVLSNDNISYGYNAANGSYEDLMAAGILDPTKVVRCCIE
HAAVVAKSFLTSDVVIVEAQESKPVRVRPPMPPRNLIPPIPASVSGIRV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggatgccgcttcctcctccttctcctccatccctctccagcaagggccccacc
ctgcccttctcccccaagaagtccccgccgatgcccgtgtacaaggacctccacttcaac
cgcgacctctctgccaccaagaagttgcaggtaggcgtggacctggtagcgcggctggtc
ggggtgaccctggggcccaaggggaggaatgtggtgctcggcaacaagtatggccctccc
aagatcgtcaacgatggggagacggtcctcaaggagatcgaattggaggatccgttggaa
aatctaggagttaaattagtcagacaggccggagccaggacgaacgatattgctggcgat
ggctgtaccacttctataatccttgctcaaggcctgattgctgaaggaatgaaggttctt
gctgctggcatgaatccggtccagatcgcccgtggcattgggaagacttctgatgcttta
gtttctgaacttaagttgatgtcgcgggagatcgaagaccatgagatagtgcacgtggct
gcagttagcgctggaaatgattactcggttggaaacatgatttcggatgctttcaaaaga
gtgggcagggaaggcatggttagaattgaaaatggaagaggcattgaaaacagtttagat
atcgtcgaaggaatgcaatttgaacgtggttacctctcaccttatttcgtgactaatcat
gcgagtatgtccacggagttcactgactgtaagatcctgttggctgacaagataatttct
gatccaagggagctcttaagagtatgctttagtgctgtaaaggaagattttccattgtta
ataattgctgaggacatcgaagaagaagcattggctactttgaccagaaacaagctatcg
ggtatgatcaaggtggctgcaactaaggccccttcttttggagaacagaaaacccaatgt
ttggaggacattgcaatcataacaggaggtacagtagtaagagaagacatgggatacaca
ctagaagaagcagggaaagaggttttaggttctgcttctaaagtggtaatcaaaaatgat
tcaacactgattgttactgatggaagcaacctccatgcagttgagaaaagggttgctcag
atgaaaggccaaattgagaactcaaaggagaggtaccagaaaaagatactgggtgagagg
attgcaaggctatgtggtgcgattgcaatcattcaggtcggtgctcaaacagtcattgag
ctcaaagataagaagctgagaattgaagatgcccttaatgcaaccatggcagctattgag
gaaggtgttgtagttggtggtggatgtagcctattgagattatccaagaagattgacata
atcaaggaatcattggataatgcggagcagaagattggtgctgacatcttcaaaaatgcc
ctgagctaccctaccacactaatagcaaacaatgctggtatgagtgggaagttcgttgtc
gaaaaggtactttcgaatgacaatataagttatggctacaatgctgccaatggctcctac
gaggacttgatggctgctggaatattagacccaacaaaggttgtgaggtgttgcatagag
catgctgctgttgttgccaagtcttttctgacctcagatgtggtgatcgttgaggcacaa
gagagcaaaccggttcgtgtaaggcccccaatgccccctaggaacctgattcccccaatt
cctgcatcagtttcaggtattcgagtgtag
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